DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta6 and PAC1

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_188850.1 Gene:PAC1 / 821774 AraportID:AT3G22110 Length:250 Species:Arabidopsis thaliana


Alignment Length:192 Identity:48/192 - (25%)
Similarity:73/192 - (38%) Gaps:27/192 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FSP----YE--------SNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGS 74
            |||    |:        .|.||.:.|...|..|:..:.:::|.....|.:..|::|:........
plant    12 FSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAV 76

  Fly    75 AGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFF----PYYVSNILAGIDN 135
            ||..:|...|..:.:|:.|.|...:...|..|.:.|.|.........|    |:.||.:.||.|.
plant    77 AGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK 141

  Fly   136 EGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVA 197
            .....:|..||.|:.......|.|......|.:|      |....:||     |:|.||.:|
plant   142 HHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSIL------KQDYKDDA-----TREEAVELA 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 48/192 (25%)
PAC1NP_188850.1 proteasome_alpha_type_4 3..215 CDD:239721 48/192 (25%)

Return to query results.
Submit another query.