DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and PAG1

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001323455.1 Gene:PAG1 / 817244 AraportID:AT2G27020 Length:351 Species:Arabidopsis thaliana


Alignment Length:186 Identity:45/186 - (24%)
Similarity:70/186 - (37%) Gaps:40/186 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NGGSIVAIAGDDFAVIAADTRLSS-----GYN--IHSRTQSKLFKLSPQTVLGSAGCWADTLSLT 85
            |.|::|.|...|..|:..:..::|     |.|  |||        :.....:..||..||...:.
plant   135 NSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRIHS--------VHRHAGMAVAGLAADGRQIV 191

  Fly    86 GSIKVRMQSYEHTHLRTM----TTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDP 146
            ...|...:|||..:...:    .:|.||..:.:........|:....||.|.|.:|. .:|..:|
plant   192 ARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVILGGYDRDGP-QLYMIEP 255

  Fly   147 IGHCEKATYRAGGTAGTLLQPVLDNQIGH-KNMNLEDADKIKLT----KERAVSVA 197
            .|    .:||..|.|           ||. |.....:.:|:.|:    ||..:.||
plant   256 SG----ISYRYFGAA-----------IGKGKQAAKTEIEKLNLSEMTCKEGVIEVA 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 45/186 (24%)
PAG1NP_001323455.1 proteasome_alpha_type_3 107..318 CDD:239720 45/186 (24%)

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