DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and PSMB10

DIOPT Version :9

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_002792.1 Gene:PSMB10 / 5699 HGNCID:9538 Length:273 Species:Homo sapiens


Alignment Length:224 Identity:51/224 - (22%)
Similarity:96/224 - (42%) Gaps:27/224 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VPGMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCW 78
            :||:|.|.   ....|.:|..:...|..::.||||.::...:..::..|:..::|:.....||..
Human    27 LPGLKVPH---ARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVA 88

  Fly    79 ADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRR-FFPYY----VSNILAGIDNEGK 138
            ||....|..:..:|:      |..::|....::.::....|: .|.|.    .|.|:.|:|..|.
Human    89 ADAEMTTRMVASKME------LHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLTGP 147

  Fly   139 GVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFIS 203
             .:|...|.|...:..:.|.|:.......||:::. ..||.||.|..:.:          :...:
Human   148 -QLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRF-QPNMTLEAAQGLLV----------EAVTA 200

  Fly   204 AAERDIYTGDSVLINIITKDGIE-VRTLT 231
            ....|:.:|.:|...:|||.|.: :|||:
Human   201 GILGDLGSGGNVDACVITKTGAKLLRTLS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 47/216 (22%)
PRE1 24..225 CDD:223711 43/205 (21%)
PSMB10NP_002792.1 proteasome_beta_type_7 40..227 CDD:239732 43/204 (21%)
Pr_beta_C 232..267 CDD:403609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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