DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta6 and Prosalpha4T1

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster


Alignment Length:212 Identity:51/212 - (24%)
Similarity:85/212 - (40%) Gaps:28/212 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQ 93
            |.:.|.:.|.:..|:..: :.|.......||..|:..|.....|..||..||...|....:|..|
  Fly    31 GSTAVGVRGANCVVLGVE-KSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQ 94

  Fly    94 SYEHTHLRTMTTEAVAQMLSIAMYNRRFF------PYYVSNILAGIDNEGKGVVYSYDPIG--HC 150
            |:.......:|.|.:.:.|  |...:::.      |:.:|.::.|||.:|...::..:|.|  |.
  Fly    95 SHRLNFENQVTLEYITRYL--AQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHE 157

  Fly   151 EKATYRAGGTAGTLLQ----PVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYT 211
            .||| ..|..|.|:.:    ...|:::..|      .|.|||.....:.|...:.:......:..
  Fly   158 YKAT-ATGRWANTVREFFEKAYSDHEVTTK------CDAIKLAMRALLEVTQMSQMRLEVAVLEN 215

  Fly   212 G------DSVLINIITK 222
            |      |||:|:.|.|
  Fly   216 GKPMKMLDSVVISEIVK 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 51/212 (24%)
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 44/191 (23%)

Return to query results.
Submit another query.