DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Prosalpha4T2

DIOPT Version :9

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster


Alignment Length:179 Identity:47/179 - (26%)
Similarity:77/179 - (43%) Gaps:15/179 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQ 93
            |.:::.:..::..||..:.| |.|.....|...|:..|....|:..:|..||...|....::..|
  Fly    31 GSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQ 94

  Fly    94 SYEHTHLRTMTTEAVAQMLSIAMYN------RRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEK 152
            |:.....:..|.|.:.:.::....|      ||  |:.:|.::.|.|.:|...::..||.|...:
  Fly    95 SHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRR--PFGLSCLVGGFDEDGTPHLFQTDPSGIFYE 157

  Fly   153 ATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADK---IKLTKERAVSVAS 198
              :|| .|.|...|||.|....|.:..|..||:   ||......|||:|
  Fly   158 --WRA-NTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVSVSS 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 47/179 (26%)
PRE1 24..225 CDD:223711 47/179 (26%)
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 47/179 (26%)
Ntn_hydrolase 5..214 CDD:294319 47/179 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441109
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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