DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Prosalpha5

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster


Alignment Length:225 Identity:48/225 - (21%)
Similarity:90/225 - (40%) Gaps:49/225 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQ 93
            |.:.:.|...:..|:|.:.|::|...:.| |..|:.::.......::|..||..:|....:|..|
  Fly    34 GSTAIGICTPEGVVLAVEKRITSPLMVPS-TVEKIVEVDKHIGCATSGLMADARTLIERARVECQ 97

  Fly    94 SYEHTHLRTMTTEAVAQMLS--------------IAMYNRRFFPYYVSNILAGIDNEGKGVVYSY 144
            ::...:...|:.|:.||.:|              .|..:|   |:.|:.:.|||: .|:..::..
  Fly    98 NHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSR---PFGVAILFAGIE-AGQPQLWHM 158

  Fly   145 DPIG----HCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAA 205
            ||.|    |..||.  ..|:.|.             ..||:|..:..||.:.|:.::.:|.....
  Fly   159 DPSGTFVRHGAKAI--GSGSEGA-------------QQNLQDLFRPDLTLDEAIDISLNTLKQVM 208

  Fly   206 ERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
            |..           :....:||.|:|..::
  Fly   209 EEK-----------LNSTNVEVMTMTKERE 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 48/223 (22%)
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 46/218 (21%)

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