DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Prosbeta4

DIOPT Version :9

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster


Alignment Length:198 Identity:44/198 - (22%)
Similarity:82/198 - (41%) Gaps:15/198 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSY 95
            :::.|.|.||.::||||..:....:....|:|:.|:|...::.:.|...||...|..|...:..|
  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALY 67

  Fly    96 EHTHLRTMTTEAVAQML--SIAMYNRRFFPYYVSNILAGID-NEGKGVVYSYDPIGHCEKATYRA 157
            :..:...::....|...  ::|.|.|...||.|...:||.| |.|..:.: .|.:.:.....| |
  Fly    68 KMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTF-IDYLANALPVNY-A 130

  Fly   158 GGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITK 222
            |...|.:....:.::..|.|          :|:..|..|.........:|.:....:..:.::.|
  Fly   131 GHGYGAIFASSIYDRYWHPN----------ITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDK 185

  Fly   223 DGI 225
            ||:
  Fly   186 DGV 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 44/198 (22%)
PRE1 24..225 CDD:223711 43/196 (22%)
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 44/198 (22%)
proteasome_beta_type_2 1..192 CDD:239727 44/198 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441144
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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