DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Prosbeta4

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_609804.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster


Alignment Length:198 Identity:44/198 - (22%)
Similarity:82/198 - (41%) Gaps:15/198 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSY 95
            :::.|.|.||.::||||..:....:....|:|:.|:|...::.:.|...||...|..|...:..|
  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALY 67

  Fly    96 EHTHLRTMTTEAVAQML--SIAMYNRRFFPYYVSNILAGID-NEGKGVVYSYDPIGHCEKATYRA 157
            :..:...::....|...  ::|.|.|...||.|...:||.| |.|..:.: .|.:.:.....| |
  Fly    68 KMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTF-IDYLANALPVNY-A 130

  Fly   158 GGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITK 222
            |...|.:....:.::..|.|          :|:..|..|.........:|.:....:..:.::.|
  Fly   131 GHGYGAIFASSIYDRYWHPN----------ITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDK 185

  Fly   223 DGI 225
            ||:
  Fly   186 DGV 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 44/198 (22%)
Prosbeta4NP_609804.1 proteasome_beta_type_2 1..192 CDD:239727 44/198 (22%)

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