DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Prosbeta4R1

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster


Alignment Length:212 Identity:45/212 - (21%)
Similarity:87/212 - (41%) Gaps:19/212 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SIVAIAGDDFAVIAADT-RLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQS 94
            :|:.:.|.||.::|:|| |..|...:....: |..::|...::.:||...|.|..:..|...|..
  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVR-KTHRISDYCMMSTAGDGGDCLKFSDFILRNMDL 66

  Fly    95 YEHTHLRTMTTEAVAQML--SIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRA 157
            |:.|:...:|.......:  .::.|.:....:.||.::.|.|......::..|.:|:.....|..
  Fly    67 YKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYGG 131

  Fly   158 GGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITK 222
            .|.|.....|:           ||:..|..:..:.|..|.....|...:|.:....::.:.:|:|
  Fly   132 HGAAMNFCTPI-----------LEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISK 185

  Fly   223 DGI----EVRTLTLRQD 235
            :||    .:...:||.|
  Fly   186 NGITKMNSINLESLRGD 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 44/210 (21%)
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 42/201 (21%)

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