DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Prosalpha4

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster


Alignment Length:208 Identity:39/208 - (18%)
Similarity:81/208 - (38%) Gaps:22/208 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQ 93
            |.:.|.:.|.:..|:..:.: |.......|...|:..|....|:..||..||...:....:|..|
  Fly    31 GSTAVGVRGANCVVLGVEKK-SVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQ 94

  Fly    94 SYEHTHLRTMTTEAVAQMLSIAMYNRRFF------PYYVSNILAGIDNEGKGVVYSYDPIGHCEK 152
            |:.......:|.|.:.:.  ||...:::.      |:.:|.::.|.|.:|...::..:|.|...:
  Fly    95 SHRLNVEDPVTLEYITRF--IAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLFQTEPSGIFYE 157

  Fly   153 ATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLI 217
            ....|.|.:..:::...:.....:.:..|..         ||.:|....:..|:    :|.:.|.
  Fly   158 YKANATGRSAKVVREFFEKSYREEEVANEHG---------AVKLAIRALLEVAQ----SGQNNLE 209

  Fly   218 NIITKDGIEVRTL 230
            ..|.::|..::.|
  Fly   210 VAIMENGKPLKML 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 39/208 (19%)
Prosalpha4NP_525092.1 proteasome_alpha_type_7 5..213 CDD:239724 36/197 (18%)

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