DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Prosbeta2R1

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster


Alignment Length:215 Identity:56/215 - (26%)
Similarity:97/215 - (45%) Gaps:28/215 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADT--LSLTGSIKVR 91
            |.|||.|...|..::.||||.:.|..:..:..||:..|........||..|||  ::||.|.::.
  Fly    48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELD 112

  Fly    92 MQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYY----VSNILAGIDNEGKGVVYSYDPIGHCEK 152
            :.       |..|...|..:.:..|..|..|.|.    .:.::.|:|..|. .:|...|.|..:|
  Fly   113 LH-------RLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGP-QLYCIYPCGSNDK 169

  Fly   153 ATYRAGGTAGTLLQPVLDNQIGHK-NMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVL 216
            ..|.|.|:.......||::  |.| :::||...  :|.:|   ::::..|     .|:.:|.::.
  Fly   170 IPYAAMGSGTLAAMSVLEH--GWKPDLDLEQGK--QLVRE---AISAGVF-----NDLGSGSNID 222

  Fly   217 INIIT-KDGIEVRTLTLRQD 235
            :.:|| |..:.:||.|:..:
  Fly   223 LCVITAKGAVYLRTDTIASE 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 56/213 (26%)
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 52/206 (25%)
Pr_beta_C 240..274 CDD:463597 0/3 (0%)

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