DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Psma7

DIOPT Version :9

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_036099.1 Gene:Psma7 / 26444 MGIID:1347070 Length:248 Species:Mus musculus


Alignment Length:213 Identity:47/213 - (22%)
Similarity:77/213 - (36%) Gaps:33/213 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQ 93
            |.:.|.:.|.|..|:..:.: |.......||..|:..|.....:..||..||...:....:|..|
Mouse    29 GSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQ 92

  Fly    94 SYEHTHLRTMTTEAVAQMLSIAMYNRRFF------PYYVSNILAGIDNEGKGVVYSYDPIGHCEK 152
            |:..|....:|.|.:.:.  ||...:|:.      |:.:|.::.|.|.:|...:|..||.|    
Mouse    93 SHRLTVEDPVTVEYITRY--IASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSG---- 151

  Fly   153 ATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLI 217
             ||.|...          |.||.         ..|..:|......:|..|...:..|......|:
Mouse   152 -TYHAWKA----------NAIGR---------GAKSVREFLEKNYTDDAIETDDLTIKLVIKALL 196

  Fly   218 NIITKDGIEVRTLTLRQD 235
            .::...|..:....:|:|
Mouse   197 EVVQSGGKNIELAVMRRD 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 46/211 (22%)
PRE1 24..225 CDD:223711 44/201 (22%)
Psma7NP_036099.1 proteasome_alpha_type_7 3..211 CDD:239724 45/208 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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