DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Psmb7

DIOPT Version :9

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_035317.1 Gene:Psmb7 / 19177 MGIID:107637 Length:277 Species:Mus musculus


Alignment Length:221 Identity:52/221 - (23%)
Similarity:93/221 - (42%) Gaps:26/221 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DYQVPGMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSA 75
            |:...|.|.|   .....|.:|..:...|..|:.||||.:.|..:..:..||:..:||......|
Mouse    28 DFAKKGFKLP---KARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGA 89

  Fly    76 GCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSI-AMYNRRFFPY--YV--SNILAGIDN 135
            |..|||...|..|...::      |.::||..:.::::. .|..:..|.|  |:  :.:|.|:|.
Mouse    90 GTAADTDMTTQLISSNLE------LHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDV 148

  Fly   136 EGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDT 200
            .|.. :||..|.|..:|..|...|:.......|           .||..:..:.:|.|..:.|:.
Mouse   149 TGPH-LYSIYPHGSTDKLPYVTMGSGSLAAMAV-----------FEDKFRPDMEEEEAKKLVSEA 201

  Fly   201 FISAAERDIYTGDSVLINIITKDGIE 226
            ..:....|:.:|.::.:.:|:|..::
Mouse   202 IAAGIFNDLGSGSNIDLCVISKSKLD 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 48/210 (23%)
PRE1 24..225 CDD:223711 48/205 (23%)
Psmb7NP_035317.1 PRE1 41..225 CDD:223711 48/201 (24%)
proteasome_beta_type_7 44..232 CDD:239732 47/202 (23%)
Pr_beta_C 236..271 CDD:289249
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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