DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and Psmb5

DIOPT Version :10

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:183 Identity:42/183 - (22%)
Similarity:80/183 - (43%) Gaps:12/183 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTE 106
            ::|||:|.::|..|.|:|..|:.:::|..:...||..||.......:..:.:.||..:...::..
Mouse    72 IVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVA 136

  Fly   107 AVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDN 171
            |.:::|:..:|..:.....:..::.|.|..|.|:.| .|..|:....|..:.|:.......|:|.
Mouse   137 AASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYY-VDSEGNRISGTAFSVGSGSVYAYGVMDR 200

  Fly   172 QIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDG 224
            ...:           .|..|.|..:|......|..||.|:|.:|.:..:.:||
Mouse   201 GYSY-----------DLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDG 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 42/183 (23%)
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 42/183 (23%)

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