DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and pbs-6

DIOPT Version :9

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_498806.1 Gene:pbs-6 / 176161 WormBaseID:WBGene00003952 Length:258 Species:Caenorhabditis elegans


Alignment Length:231 Identity:91/231 - (39%)
Similarity:140/231 - (60%) Gaps:16/231 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 HPD-----------FSPYESNGGSIVAIAGDDFAVIAADTRLS-SGYNIHSRTQSKLFKLSPQTV 71
            ||:           ::||...|||..||:|::||::|:|||:: :..||.:|...|:..|:...:
 Worm    30 HPEWMSSRQIERQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNII 94

  Fly    72 LGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNE 136
            |.::|.:.|.|.|...::.|:..|...:...|:.:..|::||..:|.|||||||...||||||..
 Worm    95 LTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEH 159

  Fly   137 GKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTF 201
            |||.|:||||||..|:..|.|.|.|..::.|.||.||||..:: |..::.:||.:||:|:..|:|
 Worm   160 GKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQIGHVTLS-EGYERPELTLDRAISLMKDSF 223

  Fly   202 ISAAERDIYTGDSVLINIITKDG--IEVRTLTLRQD 235
            ..||||:|.|||.:.: :|.:.|  :.|:.|.||:|
 Worm   224 RGAAEREISTGDKIHL-VIAEAGKPVVVKFLPLRED 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 88/215 (41%)
PRE1 24..225 CDD:223711 84/203 (41%)
pbs-6NP_498806.1 PRE1 38..246 CDD:223711 83/209 (40%)
Ntn_hydrolase 44..258 CDD:294319 88/215 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167889
Domainoid 1 1.000 151 1.000 Domainoid score I2657
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2087
Inparanoid 1 1.050 162 1.000 Inparanoid score I2848
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54193
OrthoDB 1 1.010 - - D1092660at2759
OrthoFinder 1 1.000 - - FOG0004805
OrthoInspector 1 1.000 - - oto17741
orthoMCL 1 0.900 - - OOG6_101631
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1009
SonicParanoid 1 1.000 - - X3385
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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