DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta6 and PSMA8

DIOPT Version :9

Sequence 1:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_653263.2 Gene:PSMA8 / 143471 HGNCID:22985 Length:256 Species:Homo sapiens


Alignment Length:221 Identity:49/221 - (22%)
Similarity:86/221 - (38%) Gaps:43/221 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSA------GCWADTLSLTGS 87
            |.:.|.|.|.:..|:..:.: |.......||..|:..|.....:..|      |..||...:...
Human    31 GSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINR 94

  Fly    88 IKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFF------PYYVSNILAGIDNEGKGVVYSYDP 146
            .:|..||::.|....:|.|.:.:.  ||...:::.      |:.:|.::.|.|::|...:|..||
Human    95 ARVECQSHKLTVEDPVTVEYITRF--IATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDP 157

  Fly   147 IG--HCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDI 209
            .|  |..||  .|.|.:...::..|:     ||.. |||            :|||:      ..|
Human   158 SGTYHAWKA--NAIGRSAKTVREFLE-----KNYT-EDA------------IASDS------EAI 196

  Fly   210 YTGDSVLINIITKDGIEVRTLTLRQD 235
            ......|:.::...|..:....:|::
Human   197 KLAIKALLEVVQSGGKNIELAIIRRN 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 49/219 (22%)
PRE1 24..225 CDD:223711 47/209 (22%)
PSMA8NP_653263.2 PRK03996 5..237 CDD:235192 49/221 (22%)
proteasome_alpha_type_7 5..219 CDD:239724 48/216 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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