DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4098 and Trpm2

DIOPT Version :10

Sequence 1:NP_660192.1 Gene:CG4098 / 39854 FlyBaseID:FBgn0036648 Length:307 Species:Drosophila melanogaster
Sequence 2:XP_038954482.1 Gene:Trpm2 / 294329 RGDID:1311889 Length:1545 Species:Rattus norvegicus


Alignment Length:285 Identity:107/285 - (37%)
Similarity:159/285 - (55%) Gaps:29/285 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HLMCRNNMYPRSSVLRYPVSDEQVFWSEPFPDYCPPAYTAPHIGGQVWADPPLPSDTFWP----Q 99
            |:..|:.:||.:.::|:||.:|:|.|...|..|.||.|||......: .||  ..||..|    .
  Rat  1274 HVSARHLLYPDARIMRFPVPNEKVPWEAEFLIYDPPFYTAEKKDATL-TDP--VGDTAEPLSKIN 1335

  Fly   100 WNQLDGQVNRESFHGAYNVQNGLPLNPIGRTGLTGRGSLGRWGPNHAADPIVTRWKRDDQGAIVA 164
            :|.:||.::|.||||.|.||.|.||||:|||||.|||||..:||||...|:||||||:..|.|..
  Rat  1336 YNVVDGLMDRCSFHGTYVVQYGFPLNPMGRTGLRGRGSLSWFGPNHTLQPVVTRWKRNQGGGICR 1400

  Fly   165 NPTTGKNIIQMVAIQRSDNKLWAIPGGMVDPGENVSVTLKREFTEEA-LNFTDKANMVERFFQAG 228
            ...  :.:::::.::...::.||:|||..:||:.:...||:...:|. :.|......        
  Rat  1401 KSV--RKMLEVLVVKLPQSEHWALPGGSREPGKMLPRKLKQVLQQEYWVTFETLLRQ-------- 1455

  Fly   229 GVQVYQGYVDDFRNTDNAWMETTALNFH--DEDGSQVGQLE--LMAGDDASNVR-------WTDV 282
            |.:||:|||||.|||||||:||.|::.|  |::..::.:||  |...|...:.|       |..|
  Rat  1456 GTEVYKGYVDDPRNTDNAWIETVAVSIHFQDQNDVELKRLEENLQTHDPKESARGLEMSTEWQVV 1520

  Fly   283 DSNLKLHANHADIVREVVIRRNAHW 307
            |..:.|:.||..|:::|.....||:
  Rat  1521 DRRIPLYVNHKKILQKVASLFGAHF 1545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4098NP_660192.1 NUDIX_ADPRase_Nudt9 125..303 CDD:467538 69/189 (37%)
Trpm2XP_038954482.1 LSDAT_euk 140..363 CDD:476852
TRPV <717..1072 CDD:454755
Ion_trans 801..>977 CDD:459842
NUDIX_ADPRase_Nudt9 1361..1538 CDD:467538 68/186 (37%)
Blue background indicates that the domain is not in the aligned region.

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