DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spd-2 and Cep192

DIOPT Version :9

Sequence 1:NP_648906.1 Gene:spd-2 / 39850 FlyBaseID:FBgn0027500 Length:1146 Species:Drosophila melanogaster
Sequence 2:XP_006526304.1 Gene:Cep192 / 70799 MGIID:1918049 Length:2515 Species:Mus musculus


Alignment Length:1448 Identity:287/1448 - (19%)
Similarity:462/1448 - (31%) Gaps:465/1448 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 AVHERLREERLRALETLE--------KPRPSRSSQAKSTALQMRLSTNISELVTDDTI------- 100
            ||.|.||.....:.||.:        |.......|.|..|..:....|:...:..:|.       
Mouse   352 AVDETLRSTYRHSTETEDGFDPADYIKQDSESPHQNKHFASDLETVPNVDRCLNTETPTVFIQKD 416

  Fly   101 -DLNSSSSFALVTPATKGTNISFEPAEITGRSTLCQAGKQRR-----------REKPSLSVAEIL 153
             |:.:||.       |.|.|      .|....||.....:||           .:|..||...:.
Mouse   417 GDIAASSK-------TNGDN------GINSPDTLWSPTSERRACGLYESDSKTSDKGELSQNVVY 468

  Fly   154 KSSFVEKARLLERKLQDASQAEASYHLSRGSSSSLSDSFNCSRSLPRTADMSELSLNGGGGFSFG 218
            ||   |..|.:         .:.:|:.|......|..|.|        .:|:|       .|..|
Mouse   469 KS---EDGRWV---------TDLAYYTSFIDQQDLQMSPN--------NEMNE-------DFRSG 506

  Fly   219 SASLAAEGQDES-------FAPAE---LMQSKLVLGEISWAQEFTAMPTATLSTQALKKIAAPTS 273
            |.:|....:||.       |...|   :..:.:.||:.||        .||::...|:| :..||
Mouse   507 SDALDLIAKDEEEFNKEHPFIQDEKIDVQNTPVALGDNSW--------VATVNYHLLRK-SLGTS 562

  Fly   274 EIETSVSNSVLAGDPDFSLGNYFQTRSENIWNIVSNSSPNRSRTNQPLLEPE---------SNVT 329
            :.:.. :.|.|.    .|||.:|..|||.:..:.......|......:..||         |:::
Mouse   563 DFDKD-NGSYLR----LSLGEFFAERSEALGCLGGGKDVKRPSFGYFIRSPEEREPVALIKSDLS 622

  Fly   330 LDSVGEKTPQP-------DNKTYTKTDAITGSNL--GRNLMRKMQQD-----------RIETALK 374
            ...:.::..||       |....::.....||.:  ...|.|..|.|           :.|..|.
Mouse   623 RSDLEKEATQPYRGFSSGDLNEQSQVQLSEGSVMLKAEELQRNSQVDEDDITLTASRNQTEDTLC 687

  Fly   375 SRNGLAAKETKRPPSSSE--ILSLSAIDKALRDIDLNSD-TSTVEVVNHLWEHGRGNNYDDGENK 436
            |.|.|  :|.|...|..|  :|.:|.|..|..|:.:::| ...|.::..|...||...:.|...:
Mouse   688 SNNKL--QEYKNTLSGGEDSVLRISTIASAFADVSVSTDPAQLVTMMKALRNKGRSKPFQDDGTQ 750

  Fly   437 ENQSSNSHAERTSCGSNKLTDTMSFTDSVLNSTDFRHLQQSISRKPLS----------------P 485
            |:..:.||........:..::.... :..|..|:|...:.  :|:|||                .
Mouse   751 EDCPNISHVLLNDLEKSNRSNAFDM-EKYLTKTEFSSCEG--AREPLSRAGTSDMWDLCSPERQT 812

  Fly   486 LADHPQITISRADT-DPVETEA--------EADIDE-----WPSTPVKEPSRRVRRTKI------ 530
            :.|...:.:...:: :..||.|        |:|..|     ..|..|...:|..|.:.:      
Mouse   813 VQDRSMVNVCATNSREAEETTAAIFCAENIESDTQESLRTIASSDSVLTSTRENRNSAMGRMPPS 877

  Fly   531 ---------SPRAAS-----------------PSSS------------DGVRPLTCTEDENDEED 557
                     |.:|||                 ||.|            |..|...|..:.:..:.
Mouse   878 VDTLLDVRNSEKAASVSIAASRSDSLLRNPRVPSFSIVEQCEEIQDNRDHGRKKECVSETSSSDK 942

  Fly   558 ----EDKTPVNKKRVSIATMG---------------LIPRKASSLS--STRLDGCDVAVASSTER 601
                ||...|..|.|.:.|..               |.|...||.|  |....||   |..|.:.
Mouse   943 HVTFEDGLVVLPKSVDLKTASPESGRSGFQDEESFRLSPLSHSSPSEISGNFAGC---VLESLDS 1004

  Fly   602 DFGISPNLAKNLSPLSSPRSCLSS-----------PLLDSTTS-----SDRRQLMSGAARKANSS 650
            .:...|:|...||.|:...:.:|.           |:..:..|     ||....:|....:|:.:
Mouse  1005 AYHQRPHLESELSQLACSHADMSRLTYVSEQENTFPVTAADESSEDHKSDLTSELSTTIVRASPT 1069

  Fly   651 PAGSEA----------------------SSTSGF-----TASGRRGLG------TSS-------- 674
            |...:|                      .|.||.     |.|.|.|..      |||        
Mouse  1070 PPREQAVEKPRDKIPGQNAEKVSMPWVIQSKSGLANMRETPSLRTGFEDGEPNFTSSQDISSESR 1134

  Fly   675 --VAVPRSISRCSNSSE-------------FSHRDGKLLP--LKVTHTTLCWG----STKL-RTD 717
              :...:.:...|.|||             .:||.|..:|  .::...|:..|    ||:| ...
Mouse  1135 EPLEAGKMMDSTSGSSEQDLIGQALLDKPALNHRSGPAVPNLPELIQKTVDQGQRLSSTRLSAAS 1199

  Fly   718 VRKSMQVKNTADKRLVIRLGIQGPGFQLVGTDSSTIT-LQAMECRSVVINFCPTVCGAAIGALSF 781
            ...|.||.|              ||..  ||..:... :.|....:.|:| .|.||.|.....|.
Mouse  1200 SEASSQVPN--------------PGAS--GTQHNPAPHISAHASVAKVMN-QPAVCPALWTGHSL 1247

  Fly   782 YAPPGAHNSN------QPGLEI-PLYGY----GGSASITINGLLKGPVGASFL----TIGDVCEL 831
            |..|||.:.|      ..|::: .:.||    ..:..:..:||..||..||.|    ::.::|..
Mouse  1248 YIAPGAPSGNATLSQCHAGMQVCGISGYSPYPAAAPELVASGLYLGPSLASGLMAPSSLYNLCST 1312

  Fly   832 SAG----------PLSANLKF--HNKGPLTAF----------------VGIS----------VDS 858
            :|.          |:..|.:.  .:.|.:.||                |||:          .|.
Mouse  1313 AAPQNLLSTAKPFPMVTNCETEPRDSGMMPAFGNARVPEELRFPHACCVGIASQTLLSVLNPTDH 1377

  Fly   859 TVLMKLRL-------------SEAFEVRPSRLILPPNSERCVQILFRPNREDLKNILKKTAQVLT 910
            .:.:.:|:             ::...|..:::::.|.:...::|||.|..   ..|.:.|..|.:
Mouse  1378 WLQVSIRVLSIWVNGEKVDLSTQTCLVFKNKVVIRPQATEEIKILFIPTS---SGIFRCTFSVAS 1439

  Fly   911 LANMRIFCGDEPNRQRMRSLVQRMSSRQREKLTSPMLDSIWGEFPDEQPVRNIGQLNEPPEFILD 975
            .    :|..|.....:..:|..|::      ||:.....:.....:::.|.:.|.|.......|.
Mouse  1440 W----LFSADADTVGQAEALGSRVT------LTAIAETPVIEVETEKKGVLDFGDLTYAGWKALP 1494

  Fly   976 LVTVVR---IIDVALTLN------RDFDESSES---SLMFLPEADETVLFRTICVANSPTPTQ-- 1026
            |..:.|   .:.:.|.:|      |.|..|.|.   ||...|.||.|.......|.:...|..  
Mouse  1495 LKLINRTHATVPIRLIINANAVAWRCFTFSKEPIHVSLKAAPHADITAQLAAPSVVSHVMPASYD 1559

  Fly  1027 ---------------------SHLLEPVDELL-----EADTTTLTPVEQNWCVQPGLLEFGVGCS 1065
                                 |.:|...:|.|     |.|:....||.::..::           
Mouse  1560 GKDPEFLVVWVIFHSPKKLLTSEILGSAEEFLARVDIEVDSPNPIPVLRSVALR----------- 1613

  Fly  1066 PLATLSVTNSFCSRQLIEVTCNVPDLVRISPSECYVSP--DGGHAEI--DVRLLRSPRQDLLERE 1126
              |...|......|.|..|..    |..::.|..:..|  :.|:.|:  |:::.....|..::.|
Mouse  1614 --ARAGVARIHAPRDLQTVYL----LADVNSSTKHPLPLKNAGNIEVHLDIKVAEQGSQFSVDPE 1672

  Fly  1127 PLIVVSMENERISVPISF 1144
            .|.:  ...|...|.|||
Mouse  1673 SLFL--RPGEEHEVTISF 1688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spd-2NP_648906.1 None
Cep192XP_006526304.1 ASH <1636..1703 CDD:387191 13/55 (24%)
TRAPPC9-Trs120 <1651..>1772 CDD:370013 10/40 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7128
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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