DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx8 and VAM7

DIOPT Version :9

Sequence 1:NP_524113.1 Gene:Syx8 / 39847 FlyBaseID:FBgn0036643 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_011303.1 Gene:VAM7 / 852660 SGDID:S000003180 Length:316 Species:Saccharomyces cerevisiae


Alignment Length:242 Identity:50/242 - (20%)
Similarity:97/242 - (40%) Gaps:66/242 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 WDIEYE----------GCERLRHQLLVYLNQRQQLNPRTSQ----FVQLTSSIQTGIEQLAKDMK 59
            |...|:          |.||..::|   .|.|.....|.::    |:||:   :..:.| .|..:
Yeast    75 WQRRYDDPEMIDERRIGLERFLNEL---YNDRFDSRWRDTKIAQDFLQLS---KPNVSQ-EKSQQ 132

  Fly    60 HLKVVLDNAITWETSPEEELQQRRIDWD-------------RLTSQLREIREKFANS-SRSNVPA 110
            ||:..  :.:.|    :|.::..::|.|             |..::|.::||:.... .:.::|:
Yeast   133 HLETA--DEVGW----DEMIRDIKLDLDKESDGTPSVRGALRARTKLHKLRERLEQDVQKKSLPS 191

  Fly   111 AS------------------GSAWQDQDLGP--GHSNSSRNTALDVEA-----LKQKKTEMLAQQ 150
            ..                  |:|...||.|.  |.:.|..::..:|:.     |:|.:.:|:..|
Yeast   192 TEVTRRAALLRSLLKECDDIGTANIAQDRGRLLGVATSDNSSTTEVQGRTNNDLQQGQMQMVRDQ 256

  Fly   151 NEGLEVLSATLSRQRQLATQLGNEVEDQNNILDNLANAMDRVETGVQ 197
            .:.|..|...:..||.||.::..|::.||.:|..|.:.:|.....:|
Yeast   257 EQELVALHRIIQAQRGLALEMNEELQTQNELLTALEDDVDNTGRRLQ 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx8NP_524113.1 SNARE_Syntaxin8 147..205 CDD:277205 14/51 (27%)
VAM7NP_011303.1 PX_SNARE 13..120 CDD:132807 10/47 (21%)
SNARE_VAM7 253..311 CDD:277211 14/51 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3202
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003175
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103098
Panther 1 1.100 - - O PTHR19957
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.860

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