DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx8 and SYN8

DIOPT Version :10

Sequence 1:NP_524113.1 Gene:Syx8 / 39847 FlyBaseID:FBgn0036643 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_009388.2 Gene:SYN8 / 851219 SGDID:S000000012 Length:255 Species:Saccharomyces cerevisiae


Alignment Length:231 Identity:48/231 - (20%)
Similarity:97/231 - (41%) Gaps:34/231 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QLNPRTSQFVQLTSSIQTGIEQLAKD------MKHLKVVLDNAITWETSPEEEL----QQRRIDW 86
            :|.|.::..|.|...:.:.:|.|.|.      :.....:||...  :|:.::||    ||...:.
Yeast    28 KLAPTSNDNVTLKRQLGSILELLQKCAPNDELISRYNTILDKIP--DTAVDKELYRFQQQVARNT 90

  Fly    87 DRLTSQ-LREIREKFANSSRSNVPAASGSAWQDQDLGPGHSNSSRNTALDVEALKQ--------- 141
            |.::.: |:::|  |.|.....|.........::...|......::..|..:...|         
Yeast    91 DEVSKESLKKVR--FKNDDELTVMYKDDDEQDEESPLPSTHTPYKDEPLQSQLQSQSQPQPPQPM 153

  Fly   142 --------KKTEMLAQQNEGLEVLSATLSRQRQLATQLGNEVEDQN-NILDNLANAMDRVETGVQ 197
                    .:.:.|.:|:..|..||.::.|...::..|.||:..|| ::|.:|.|.:|.....:.
Yeast   154 VSNQELFINQQQQLLEQDSHLGALSQSIGRTHDISLDLNNEIVSQNDSLLVDLENLIDNNGRNLN 218

  Fly   198 RETQSI-GQVNRRDSTWGYWLVIIALFVAIIVVVFV 232
            |.::|: |..|.|....|..::|:.|.|.:::::.|
Yeast   219 RASRSMHGFNNSRFKDNGNCVIILVLIVVLLLLLLV 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx8NP_524113.1 SNARE_Syntaxin8 147..205 CDD:277205 17/59 (29%)
SYN8NP_009388.2 SNARE_SYN8 167..236 CDD:277212 20/68 (29%)

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