DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx8 and SYP51

DIOPT Version :10

Sequence 1:NP_524113.1 Gene:Syx8 / 39847 FlyBaseID:FBgn0036643 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_563994.1 Gene:SYP51 / 838193 AraportID:AT1G16240 Length:232 Species:Arabidopsis thaliana


Alignment Length:233 Identity:50/233 - (21%)
Similarity:106/233 - (45%) Gaps:18/233 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DSWDIEYEGCERLRHQLLVYLNQRQQLNPRTSQFVQLTSSIQTGIEQLAKDMKHLKVVLDNAITW 71
            |||...|....:|..::...:::|...........:..|:|:..|......:..|:.:|.. |..
plant     6 DSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSLQSLLAE-IHG 69

  Fly    72 ETSPEEELQQRRIDWDRLTSQLREIREKFANSSRSNVPAASGSAWQDQDLGPG---HSNSSRNTA 133
            :...|:|:.:|:    .:...||....:.||:..     .|..|.:|..|||.   ..:.||.|.
plant    70 KPISEKEMNRRK----DMVGNLRSKANQMANALN-----MSNFANRDSLLGPDIKPDDSMSRVTG 125

  Fly   134 LDVEALKQKKTEMLAQQNEGLEVLSATLSRQRQLATQLGNEVEDQNNILDNLANAMDRVETGVQR 198
            :|.:.:...:.:::.:|:||||.|..|:...:.:|..:..|::.|..::|:|...:|..::.::|
plant   126 MDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRR 190

  Fly   199 ETQSIGQVNRR----DSTWGYWLVIIALFVAIIVVVFV 232
            ..:|:..:|:.    .|.....|.::.: |.:.||:::
plant   191 VQKSLAVMNKNMRSGCSCMSMLLSVLGI-VGLAVVIWM 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx8NP_524113.1 SNARE_Syntaxin8 147..205 CDD:277205 15/57 (26%)
SYP51NP_563994.1 SNARE_Qc 139..196 CDD:277194 15/56 (27%)
SNARE 172..223 CDD:461727 9/51 (18%)

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