DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx8 and AT1G16225

DIOPT Version :9

Sequence 1:NP_524113.1 Gene:Syx8 / 39847 FlyBaseID:FBgn0036643 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001323129.1 Gene:AT1G16225 / 838191 AraportID:AT1G16225 Length:223 Species:Arabidopsis thaliana


Alignment Length:235 Identity:47/235 - (20%)
Similarity:95/235 - (40%) Gaps:42/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DSWDIEYEGCERLRHQLLVYLNQRQQLNPRTSQFVQLTSSIQTGIEQLAKDMKHLKVVLDNAITW 71
            :||..::....:|..::...:.:|..|...:|......|.::..|..||..::.||.:|      
plant     6 NSWKRKHNEAIKLSEEIDGMILERSSLAETSSYARGHASYMRRKITILANGVQTLKNLL------ 64

  Fly    72 ETSPEEELQQRRI---DWDRLTSQLREIREKFANSSR-------SNVPAASGSAWQDQDLGPGHS 126
                 .|.|.:.|   :..|....:.::|.|....:.       ||:    ||.....|:     
plant    65 -----AESQGKSISAKEMSRCKDMVEDLRSKAYQMASALDMLKFSNI----GSLLGQDDI----- 115

  Fly   127 NSSRNTALDVEALKQKKTEMLAQQNEGLEVLSATLSRQRQLATQLGNEVEDQNNILDNLANAMDR 191
             .||...:|.:.:...:...:..|::.||:|...:...::.|..:..|:..|..::|.|.:.:|.
plant   116 -MSRVIDMDNQEIVGFQRTTMKVQDKALEMLEKGVMHLKREALAMNMELGLQTRLIDRLDHHVDV 179

  Fly   192 VETGVQRETQSIGQVNRRDSTWGYWLVIIALFVAIIVVVF 231
            ..:.|:...:||      |:.     |.:.|.::::||||
plant   180 SASDVEELQRSI------DTG-----VCMTLLLSVVVVVF 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx8NP_524113.1 SNARE_Syntaxin8 147..205 CDD:277205 13/57 (23%)
AT1G16225NP_001323129.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3202
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54955
OrthoDB 1 1.010 - - D1455798at2759
OrthoFinder 1 1.000 - - FOG0003175
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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