DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx8 and fsv1

DIOPT Version :9

Sequence 1:NP_524113.1 Gene:Syx8 / 39847 FlyBaseID:FBgn0036643 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_593289.1 Gene:fsv1 / 2542946 PomBaseID:SPAC6F12.03c Length:247 Species:Schizosaccharomyces pombe


Alignment Length:247 Identity:56/247 - (22%)
Similarity:108/247 - (43%) Gaps:41/247 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLVYLNQRQQLNPR--TSQFVQ-----LTSSIQTGIEQLAKDMKHLKVVLDNAITWETSPEEELQ 80
            ||:..:..|::..|  ..:|.|     :.||::...::|.|..:....:..||    ..||..::
pombe     5 LLIIDSVSQKIRDRRKLEEFGQNPDEEIESSLKDVRQELQKLNEEQSRLEKNA----QIPEYRVR 65

  Fly    81 QRRIDWDRLTSQLREIREKFANSSR-SNVPAASGSAWQ--------DQDLGPGHS-----NSSRN 131
            :......|:..:|....|:|....| |::||...||:.        :..|.|..|     :||..
pombe    66 ESEAFLIRMQRRLESAEEEFEKQRRASSIPADGTSAFSANPQVASTNNKLTPLPSLQKTTSSSEG 130

  Fly   132 TALDVEA----------------LKQKKTEMLAQQNEGLEVLSATLSRQRQLATQLGNEVEDQNN 180
            :.:::||                |.|...:||.:|.|.|..:.|::.||:::...:..|:.:||.
pombe   131 SDIEMEAMYPVDGNDPDPINVNVLAQMHQQMLNEQEESLGGIEASVQRQKRMGYAMNTELSEQNV 195

  Fly   181 ILDNLANAMDRVETGVQRETQSIGQVNRRDSTWGYWLVIIALFVAIIVVVFV 232
            :|||:.|..||:|.........:.:|:|:...:....:|:.|...:::|..:
pombe   196 LLDNMNNDADRIERRFDHAKNRLNKVSRKAKQYPRCFIILLLCALLLLVASI 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx8NP_524113.1 SNARE_Syntaxin8 147..205 CDD:277205 17/57 (30%)
fsv1NP_593289.1 SNARE_SYN8 162..229 CDD:277212 19/66 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3202
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 55 1.000 Inparanoid score I2035
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003175
OrthoInspector 1 1.000 - - oto101513
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5676
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.850

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