DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and MAS2

DIOPT Version :9

Sequence 1:NP_001261955.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_011889.1 Gene:MAS2 / 856419 SGDID:S000001066 Length:482 Species:Saccharomyces cerevisiae


Alignment Length:480 Identity:101/480 - (21%)
Similarity:191/480 - (39%) Gaps:77/480 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLRAIAKRGYATCPRPVGDLSAVNVKV--LENKLVVATADATLPVSRVSLVLGAGSRNESYDIQG 72
            :||...:|.|:...|      ..|.|:  |.|.|.|||::.....|.:.|.:.||||.|..:::|
Yeast     1 MLRNGVQRLYSNIAR------TDNFKLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKG 59

  Fly    73 ASHLLRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLLQ- 136
            .:|:|......||::....|:|..::.:||.......||.:.|..:....:....|:.:.:.:: 
Yeast    60 CTHILDRLAFKSTEHVEGRAMAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRF 124

  Fly   137 PAFKPWELVDNAKTVVNQLNAVSTEERAI--ELVHKAAFR-NGLGNSIYSPRFQLGKLSSESLLH 198
            |.....||.:...:...:::.|..:...:  ||:|.||:. ..||:.:..||..:..:|...||.
Yeast   125 PKITEQELQEQKLSAEYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRELIPSISKYYLLD 189

  Fly   199 YVAQTFAAGRAAVVGVGIDNNT--------LAGFAQT--------LQFPSGGSKAASANWYGGDA 247
            |..:.:.........||:.:..        |..:..|        .|:..|.|....|..:|   
Yeast   190 YRNKFYTPENTVAAFVGVPHEKALELTEKYLGDWQSTHPPITKKVAQYTGGESCIPPAPVFG--- 251

  Fly   248 RKDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAA-TKRGTSAGLFGE----------- 300
            ......|   :.:..:|... :|.:..|.|.|:..||...: :..|...|::..           
Yeast   252 NLPELFH---IQIGFEGLPI-DHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYF 312

  Fly   301 AVNCAGGVGASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGL------KSASVSDKDVAR 359
            ..||.        |.|.||||:|:||..:|...:...:.||.:.:.:      |...:::.:|:|
Yeast   313 VENCV--------AFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSR 369

  Fly   360 GKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKV------- 417
            .|..||:.::....|....::::|||..:....:..:.::..|:.:....:...|:.:       
Yeast   370 AKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNN 434

  Fly   418 ---GSSKLAV------GAIGHLANV 433
               |..:..|      |:.|.:.||
Yeast   435 AGNGKGRATVVMQGDRGSFGDVENV 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_001261955.1 PqqL 22..417 CDD:223685 91/434 (21%)
Peptidase_M16 41..185 CDD:279066 35/147 (24%)
Peptidase_M16_C 190..364 CDD:282978 41/207 (20%)
MAS2NP_011889.1 PqqL 7..457 CDD:223685 97/470 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11851
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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