DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and COR1

DIOPT Version :9

Sequence 1:NP_001261955.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_009508.1 Gene:COR1 / 852235 SGDID:S000000141 Length:457 Species:Saccharomyces cerevisiae


Alignment Length:486 Identity:115/486 - (23%)
Similarity:197/486 - (40%) Gaps:117/486 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATA-DATLPVSRVSLVLGAGSRNES 67
            |..|.||..|:|      .|:       ..|..|.|.:||||. :.:...:.|.:|.|:|:.||:
Yeast    12 NQFKRSLATAVA------TPK-------AEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANEN 63

  Fly    68 YDIQGASHLLRLAGGLSTQNST-----AFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETG 127
            ....|.|:|.:.. .||.:||.     ..|::.||           .|:...|.|::...:.:..
Yeast    64 PYNNGVSNLWKNI-FLSKENSAVAAKEGLALSSNI-----------SRDFQSYIVSSLPGSTDKS 116

  Fly   128 LRYL-QDLLQPAFKPWELVDNA------KTVVNQLNAVSTEE---RAIELVHKAAFRNGLGNSIY 182
            |.:| |..:|   :...|:.::      |:|:.|:......:   |.:|.:|..||:|   ..:.
Yeast   117 LDFLNQSFIQ---QKANLLSSSNFEATKKSVLKQVQDFEENDHPNRVLEHLHSTAFQN---TPLS 175

  Fly   183 SPRFQLGKLSS-ESLLHYVAQTFA-----AGRAAVVGVG----------IDNNTLAGFAQTLQFP 231
            .|  ..|.|.| |:|:....::||     ...|.|||.|          |::..|:  .||...|
Yeast   176 LP--TRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLS--LQTGTKP 236

  Fly   232 SGGSKAASANWYGGDAR-KDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSA 295
            ....|||   :.|.:.| :|.:..:|.:::|.:|...::....:          ||.|.:...|.
Yeast   237 VLKKKAA---FLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFV----------AKLAAQIFGSY 288

  Fly   296 GLFGEAVNCAGGVGASVKAV---------------NASYSDAGLFGFVVSADSKDIGKTVEFLVR 345
            ..|..|....|     :|.:               :.||.|:||:||  |..::::....:.:..
Yeast   289 NAFEPASRLQG-----IKLLDNIQEYQLCDNFNHFSLSYKDSGLWGF--STATRNVTMIDDLIHF 346

  Fly   346 GLK-----SASVSDKDVARGKALLKARIISRYSS-----DGGLIKEIGRQAALTRNVLEADALLG 400
            .||     :.||:|.:|.|.|:|||.::...|.|     |..|   :|.:..:..:.|.......
Yeast   347 TLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANL---LGAEVLIKGSKLSLGEAFK 408

  Fly   401 AIDGISQSQVQE-AAKKVGSSKLAVGAIGHL 430
            .||.|:...|:. |.|::....:|:...|.:
Yeast   409 KIDAITVKDVKAWAGKRLWDQDIAIAGTGQI 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_001261955.1 PqqL 22..417 CDD:223685 107/453 (24%)
Peptidase_M16 41..185 CDD:279066 37/159 (23%)
Peptidase_M16_C 190..364 CDD:282978 49/210 (23%)
COR1NP_009508.1 PqqL 25..445 CDD:223685 109/467 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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