DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and AT1G51980

DIOPT Version :9

Sequence 1:NP_001261955.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_175610.1 Gene:AT1G51980 / 841627 AraportID:AT1G51980 Length:503 Species:Arabidopsis thaliana


Alignment Length:463 Identity:118/463 - (25%)
Similarity:204/463 - (44%) Gaps:53/463 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ASKTSL---LRAIAKRGYATCPRPVGDL---SAVNVKVLENKLVVATADATLPVSRVSLVLGAGS 63
            |:.|||   |:.:      :.|.|:.|.   |.:.:..|.|.|.:|:.....|.:.:.|.:..||
plant    51 AALTSLDMPLQGV------SLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGS 109

  Fly    64 RNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGL 128
            ..|:....||:|||......||.|.|.|.:.|.|:.:||..:....||.:.||:    |..:|  
plant   110 IYEAPYFHGATHLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTI----DALKT-- 168

  Fly   129 RYLQDLLQ--------PAFKPWEL--------VDNAKTVVNQLNAVSTEERAIELVHKAAFRNGL 177
             |:.::::        |||..||:        |:.|:...|.:..:      :|.:|.|.:...|
plant   169 -YVPEMVEVLIDSVRNPAFLDWEVNEELRKMKVEIAELAKNPMGFL------LEAIHSAGYSGPL 226

  Fly   178 GNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAVVGVGIDNNTLAGFAQ--TLQFPSGGSKAASA 240
            .:.:|:|...|.:|:.|.|..::.:.|.|.|..:...|:::..|...|:  |...|:...:.|..
plant   227 ASPLYAPESALDRLNGELLEEFMTENFTAARMVLAASGVEHEELLKVAEPLTSDLPNVPPQLAPK 291

  Fly   241 NWY-GGDARKDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALG-----AKAATKRGTSAGLFG 299
            :.| |||.|:.|.|.....|||.:....:|.|||:...:|:..:|     :.....:|..:.|:.
plant   292 SQYVGGDFRQHTGGEATHFAVAFEVPGWNNEKEAVTATVLQMLMGGGGSFSAGGPGKGMHSWLYR 356

  Fly   300 EAVNCAGGVGASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKSAS---VSDKDVARGK 361
            ..:|....| .|..|..:.::|.||||....:..:...|.:|...:.||..:   |:...:.|.|
plant   357 RVLNEYQEV-QSCTAFTSIFNDTGLFGIYGCSSPQFAAKAIELAAKELKDVAGGKVNQAHLDRAK 420

  Fly   362 ALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKVGSSKLAVGA 426
            |..|:.::....|.....::||||..........|..|.::|.::...:.:...||.|..|.:|:
plant   421 AATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGS 485

  Fly   427 IGHLANVP 434
            .|.:..||
plant   486 FGDVLAVP 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_001261955.1 PqqL 22..417 CDD:223685 105/424 (25%)
Peptidase_M16 41..185 CDD:279066 41/159 (26%)
Peptidase_M16_C 190..364 CDD:282978 47/184 (26%)
AT1G51980NP_175610.1 PqqL 58..480 CDD:223685 109/441 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37764
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11851
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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