DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and MPPalpha

DIOPT Version :10

Sequence 1:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_566548.1 Gene:MPPalpha / 820896 AraportID:AT3G16480 Length:499 Species:Arabidopsis thaliana


Alignment Length:484 Identity:118/484 - (24%)
Similarity:201/484 - (41%) Gaps:75/484 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MACNASKTSLLRAIAKRGYA-------------TCPRPVGD---LSAVNVKVLENKLVVATADAT 49
            :|.::|.:|.|..    ||:             :.|.|:.|   .|.:....|.|.|.:||..:.
plant    31 VATSSSSSSWLSG----GYSSSLPSMNIPLAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSP 91

  Fly    50 LPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVG 114
            .|.:.:.|.:..||..|:...:||:|||......||.|.:.|.:.|.|:.:||..:....||.:|
plant    92 NPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMG 156

  Fly   115 YTVTTTADNAETGLRYLQDLLQ--------PAFKPWELVDNAKTVVNQLNAVSTEERA--IELVH 169
            ||:    |..:|   |:.::::        |||..||:.:..:.|..::...:|....  :|.||
plant   157 YTI----DALKT---YVPEMVEVLIDSVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVH 214

  Fly   170 KAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAVVGVGIDNNTLAGFAQTL--QFPS 232
            .|.:...|.|.:|:|...:..|:.|.|.::|.:.:.|.|..:...|:|:..|....:.|  ..|:
plant   215 SAGYSGALANPLYAPESAITGLTGEVLENFVFENYTASRMVLAASGVDHEELLKVVEPLLSDLPN 279

  Fly   233 GGSKAASANWY-GGDARKDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAG 296
            ....|...:.| |||.|:.|.|.....|:|.:....:|.|||:...:|:..:|         ..|
plant   280 VPRPAEPKSQYVGGDFRQHTGGEATHFALAFEVPGWNNEKEAIIATVLQMLMG---------GGG 335

  Fly   297 LFGEAVNCAGGVG------------------ASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFL 343
            .|.     |||.|                  .|..|..:.:::.||||.......:...:.:|.:
plant   336 SFS-----AGGPGKGMHSWLYLRLLNQHQQFQSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELV 395

  Fly   344 ---VRGLKSASVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGI 405
               :..:....|:.|.:.|.||..|:.|:....|.....::||||..........|..|..:|.:
plant   396 ASEMNAVADGKVNQKHLDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQL 460

  Fly   406 SQSQVQEAAKKVGSSKLAVGAIGHLANVP 434
            :...:.:...||.:..|.:...|.:.|||
plant   461 TLKDIADFTSKVITKPLTMATFGDVLNVP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 108/441 (24%)
MPPalphaNP_566548.1 PqqL 62..484 CDD:440377 108/442 (24%)

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