DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and Uqcrc2

DIOPT Version :9

Sequence 1:NP_001261955.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_080175.1 Gene:Uqcrc2 / 67003 MGIID:1914253 Length:453 Species:Mus musculus


Alignment Length:418 Identity:138/418 - (33%)
Similarity:217/418 - (51%) Gaps:22/418 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQVG 101
            |.|.||:|:.:...|:||:.|.:.||||.|..:..|.|||||||..|:|:.:::|.|.|.|:.||
Mouse    43 LPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVG 107

  Fly   102 GTLTTWGDRELVGYTVTTTADNAETGLRYLQDL-LQPAFKPWEL--------VDNAKTVVNQLNA 157
            |.|:....||.:.|||.....:.|..:.:|.:: ..|.|:.||:        :|.|....|    
Mouse   108 GKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQN---- 168

  Fly   158 VSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAVVGVGIDNNTLA 222
              ::.|.||.:|..|::|.|.|.:|.|.:::||::||.|.::|...|.:.|.|:||:|:.::.|.
Mouse   169 --SQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLGVSHSVLK 231

  Fly   223 GFA-QTLQFPSG-GSKAASANWYGGDARKDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGA 285
            ..| |.|....| |...|.|.:.||:.|:....:....|:..:.||..| .||.||::|:..|||
Mouse   232 QVAEQFLNMRGGLGLAGAKAKYRGGEIREQNGDNLVHAAIVAESAAIGN-AEANAFSVLQHLLGA 295

  Fly   286 KAATKRG-TSAGLFGEAVNCAGGVGASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFL---VRG 346
            ....||| .:..|..::|.........|.|.||||||:||||....:.:...|:.:...   |:.
Mouse   296 GPHIKRGNNTTSLLSQSVAKGSHQPFDVSAFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKA 360

  Fly   347 LKSASVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQ 411
            :...::|..||...|..|||..:....:..|.:.|||.||....:.:....:|..||.::.:.|.
Mouse   361 VAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSVADADVV 425

  Fly   412 EAAKKVGSSKLAVGAIGHLANVPYASDL 439
            :||||..|.|.::.|.|:|.:.|:..:|
Mouse   426 KAAKKFVSGKKSMAASGNLGHTPFLDEL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_001261955.1 PqqL 22..417 CDD:223685 130/394 (33%)
Peptidase_M16 41..185 CDD:279066 53/152 (35%)
Peptidase_M16_C 190..364 CDD:282978 57/179 (32%)
Uqcrc2NP_080175.1 PqqL 31..436 CDD:223685 132/399 (33%)
Peptidase_M16 48..194 CDD:279066 52/151 (34%)
Peptidase_M16_C 199..378 CDD:282978 57/179 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I8129
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37764
Inparanoid 1 1.050 211 1.000 Inparanoid score I3650
Isobase 1 0.950 - 0 Normalized mean entropy S2797
OMA 1 1.010 - - QHG51844
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003081
OrthoInspector 1 1.000 - - oto95434
orthoMCL 1 0.900 - - OOG6_103720
Panther 1 1.100 - - LDO PTHR11851
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3910
SonicParanoid 1 1.000 - - X5219
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.810

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