Protein Alignment UQCR-C2 and pmpca

DIOPT Version :10

• Sequence 1: NP_648905.1
• Gene: UQCR-C2 / 39846
• FlyBaseID: FBgn0250814
• Length: 440
• Species: Drosophila melanogaster
• Sequence 2: NP_001007443.1
• Gene: pmpca / 492801
• ZFINID: ZDB-GENE-030131-5809
• Length: 517
• Species: Danio rerio
• Alignment Length: 518
• Identity: 119/518 - (22%)
• Similarity: 208/518 - (40%)
• Gaps: 99/518 - (19%)

  Fly     1 MACNASKTSLLRAIAKRGYATC---------------------PRPVGDLSAVN--------VKV 36
            ||.:.|:........:.|.|.|                     |:||  .::|:        :..
Zfish     1 MAAHMSRLRGWSRAQRYGIAVCRQYSSGSSYPNVSLSTPLPGIPKPV--FASVDGHEKYETKITT 63

  Fly    37 LENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLL-RLAGGLSTQNSTAFAIARNIQQV 100
            |||.|.:|:.:.......|.:::.:|||:|:....|.:|.| :|:...:.|..:...|...:::.
Zfish    64 LENGLKIASQNKFGQFCTVGILVNSGSRHEAKYPSGIAHFLEKLSFSSTAQFGSKGEILLTLEKH 128

  Fly   101 GGTLTTWGDRELVGYTVTTTADNAETGLRYLQD-LLQPAFKPWELVDNAKTVV----NQLNAVST 160
            ||.......|:...|.|:......:|.:..|.| :|||.... |.::.|:..|    ..||....
Zfish   129 GGICDCQTSRDTTMYAVSAEVKGLDTVVHLLSDAVLQPRLLD-EEIEMARMAVRFELEDLNMRPD 192

  Fly   161 EERAI-ELVHKAAFRNGLGNSIYSPRF----QLGKLSSESLLHYVAQTFAAGRAAVVGVGIDNNT 220
            .|..: |::|.||:|   ||::..|||    .:.|:..:.|..|:...:...|..:.||||::..
Zfish   193 PEPLLTEMIHAAAYR---GNTVGLPRFSPADNVEKIDKKLLHKYLQSYYCPERMVLAGVGIEHEQ 254

  Fly   221 LAGFAQ----TLQFPSGGSKAAS-----ANWYGGDAR--KDTS----GHRAVVAVA----GQGAA 266
            |...|:    .:|...|.||.|:     |.:.||..:  ||.|    |...:..:.    |..:.
Zfish   255 LVQCARKYLLNVQPVWGESKPANVDRSVAQYTGGIVKMVKDMSDVSLGPTPIPELTHIMIGLESC 319

  Fly   267 ASNHKEALAFAILEQALGAKAATKRGTSAGLFGEAVNCAGGVGA------------------SVK 313
            :...::.:.||:|...:|         ..|.|.     |||.|.                  :..
Zfish   320 SFLEEDFIPFAVLNMMMG---------GGGSFS-----AGGPGKGMFTRLYLNVLNRHHWMYNAT 370

  Fly   314 AVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGL--KSASVSDKDVARGKALLKARIISRYSSDG 376
            :.:.||.|:||.....|||.:.:.:.||.:.|..  .:.:..:.::.|.|..||:.::....|..
Zfish   371 SYHHSYEDSGLLCIHASADPRQVREMVEIITREFIQMTGTAGEMELERAKTQLKSMLMMNLESRP 435

  Fly   377 GLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDL 439
            .:.:::|||...|........|...|..::.|.::....|:..||.||.|:|.|..:|...|:
Zfish   436 VIFEDVGRQVLATGKRKLPHELCELISTVTASDIKRVTMKMLRSKPAVAALGDLTELPSYEDI 498

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
UQCR-C2	NP_648905.1	PqqL	23..428	CDD:440377	109/462 (24%)
pmpca	NP_001007443.1	PqqL	58..488	CDD:440377	105/447 (23%)