DRSC/TRiP Functional Genomics Resources

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Protein Alignment UQCR-C2 and uqcrc2a

DIOPT Version :9

Sequence 1:NP_001261955.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001002657.2 Gene:uqcrc2a / 436930 ZFINID:ZDB-GENE-040718-405 Length:460 Species:Danio rerio


Alignment Length:451 Identity:130/451 - (28%)
Similarity:230/451 - (50%) Gaps:26/451 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IAKRGYATCPR-------PVGDLSA---------VNVKVLENKLVVATADATLPVSRVSLVLGAG 62
            :::|.||...|       |:...||         |.|..|.:.||||:.:...|||::.:.:.||
Zfish    11 LSRRCYAAAARRNKALTEPLSHKSAAPPVLQPQDVQVSKLPSGLVVASLENYSPVSKIGVFVKAG 75

  Fly    63 SRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETG 127
            ||.|:.:..|.:|:||||..::|:.::||.|.|:::.:|.:|:....||.:.|::....|:.:..
Zfish    76 SRYETAENLGVTHMLRLAANMTTKGASAFKICRSLEALGASLSVTSSREHMVYSLDFLRDDFDGV 140

  Fly   128 LRYLQDL-LQPAFKPWELVDNAKTVV--NQLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLG 189
            :.||.|: ..|.|:||||.|....|.  ..|...|.:...:|.:|:||::|.|.||:|.|...||
Zfish   141 IEYLVDVTTAPDFRPWELADLTPRVKIDKALAEQSPQIGVLEKLHEAAYKNALSNSLYCPDIMLG 205

  Fly   190 KLSSESLLHYVAQTFAAGRAAVVGVGIDNNTLAGFAQTL--QFPSGGSKAASANWYGGDARKDTS 252
            |:|.:.|..:....:.:.|.|:||:|:.:..|....:..  .....|:..|.|.:.||:.|...:
Zfish   206 KISVDHLQQFFDNNYTSARMALVGLGVSHAALKTVGERFFGSHKGAGAPGAKAVYRGGELRVQGT 270

  Fly   253 GHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTS-AGLFGEAVNCAGGVGASVKAVN 316
            |......:|.:||...: .||.||::|::.|||....|||:: :....:.:..|........|.:
Zfish   271 GSLVHALLACEGAVTGS-AEANAFSVLQRILGAGPHVKRGSNISSKLSQGIAKATAQPFDATAFS 334

  Fly   317 ASYSDAGLFG-FVVS-ADS-KDIGKTVEFLVRGLKSASVSDKDVARGKALLKARIISRYSSDGGL 378
            .:|||:|||| :::| ||| :::..:....|..:....::..|:.|.|..|||..:....|...|
Zfish   335 TTYSDSGLFGLYIISQADSTREVISSAVAQVTAVAEGKLTTDDLTRAKNQLKADYLMSLESSDVL 399

  Fly   379 IKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDL 439
            ::|:|.|...:........:..:||.::.|.|.:||::....:.::.:.|:|.|.|:..:|
Zfish   400 LEELGVQLLNSGVYSSPQTVTQSIDSVTSSDVLKAARRFVEGQKSMSSCGYLENTPFLDEL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_001261955.1 PqqL 22..417 CDD:223685 122/419 (29%)
Peptidase_M16 41..185 CDD:279066 51/146 (35%)
Peptidase_M16_C 190..364 CDD:282978 47/179 (26%)
uqcrc2aNP_001002657.2 PqqL 33..443 CDD:223685 120/410 (29%)
Peptidase_M16 55..201 CDD:279066 50/145 (34%)
Peptidase_M16_C 206..385 CDD:282978 47/179 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7202
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I3691
OMA 1 1.010 - - QHG51844
OrthoDB 1 1.010 - - D1000258at2759
OrthoFinder 1 1.000 - - FOG0003081
OrthoInspector 1 1.000 - - otm24262
orthoMCL 1 0.900 - - OOG6_103720
Panther 1 1.100 - - O PTHR11851
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5219
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.840

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