DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment UQCR-C2 and CG8728

DIOPT Version :10

Sequence 1:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_610333.1 Gene:CG8728 / 35748 FlyBaseID:FBgn0033235 Length:556 Species:Drosophila melanogaster


Alignment Length:467 Identity:110/467 - (23%)
Similarity:186/467 - (39%) Gaps:69/467 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PVGDLSAVNVKVLENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQN-S 88
            |:.:.:...|..|.|.|.:|:.........|.||:.:|.|.|.....|.||.|......||.| .
  Fly    87 PLAESAITKVTTLPNGLRIASEPRYGQFCTVGLVIDSGPRYEVAYPSGVSHFLEKLAFNSTVNFP 151

  Fly    89 TAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDL-LQPAFKPWELVDNAKTVV 152
            ...||.:.:::.||.......|:.:.|..:..:...::..|.|.|: |:|.....| |..|:..|
  Fly   152 NKDAILKELEKNGGICDCQSSRDTLIYAASIDSRAIDSVTRLLADVTLRPTLSDQE-VSLARRAV 215

  Fly   153 N-QLNAV----STEERAIELVHKAAFR-NGLGNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAV 211
            | :|..:    ..|...::::|.|||| |.||.....|...|..::...|::|:....:..|..:
  Fly   216 NFELETLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPLENLDHINRNVLMNYLKYHHSPKRMVI 280

  Fly   212 VGVGIDNNTLAGFAQ-----------TLQFPSGGSK---AASANWYGGDARKDTSGHRAVVAVAG 262
            .|||:|::.|....|           |......|.|   .:.|.:.||..::..  ...:.|.||
  Fly   281 AGVGVDHDELVSHVQRYFVEDKAIWETEALEDSGPKQVDTSIAQYTGGLVKEQC--EIPIYAAAG 343

  Fly   263 --------QGAAASNH--KEALAFAILEQALGAKAATKRGTSAGLFGEAVNCAGGVGA------- 310
                    .|....:|  |:.:...:|...:|         ..|.|.     |||.|.       
  Fly   344 LPELAHVILGFEGCSHQDKDFVPLCVLNIMMG---------GGGSFS-----AGGPGKGMYSRLY 394

  Fly   311 -----------SVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGL--KSASVSDKDVARGKA 362
                       |..|.|.:|.|.|||....||..:.:...||.|.|.:  .:|....:::.|.|.
  Fly   395 TKVLNRYHWMYSATAYNHAYGDCGLFCVHGSAPPQHMNDMVEVLTREMMGMAAEPGREELMRSKI 459

  Fly   363 LLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKVGSSKLAVGAI 427
            .|::.::....|...:.:::|||..:|.........:..|:.::.:.:|..|:::.||..:|.|.
  Fly   460 QLQSMLLMNLESRPVVFEDVGRQVLVTGQRKRPQHFIKEIESVTAADIQRVAQRLLSSPPSVAAR 524

  Fly   428 GHLANVPYASDL 439
            |.:.|:|..|.:
  Fly   525 GDIHNLPEMSHI 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 106/454 (23%)
CG8728NP_610333.1 PqqL 79..521 CDD:440377 104/450 (23%)

Return to query results.
Submit another query.