DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment UQCR-C2 and uqcrc2b

DIOPT Version :9

Sequence 1:NP_001261955.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001001589.1 Gene:uqcrc2b / 322549 ZFINID:ZDB-GENE-030131-1269 Length:454 Species:Danio rerio


Alignment Length:438 Identity:138/438 - (31%)
Similarity:235/438 - (53%) Gaps:11/438 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RAIAKRGYATCPRPVGDL-SAVNVKVLENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASH 75
            :|..|..:|....|:..: ..|.|..|.:.||:|:.:...|.||:.:::.||||.|:.|..|.:|
Zfish    18 QAARKVDFAAAGEPLKFVPQEVQVTKLPSGLVIASLENYSPASRIGVLVRAGSRYETTDNLGVTH 82

  Fly    76 LLRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDL-LQPAF 139
            |||||..|:|:.::||.|.|.::.|||:|:....||.:.|||....|:.:|.:.||.:: ..|.|
Zfish    83 LLRLAASLTTKGASAFRICRGVEAVGGSLSVSSSRETMSYTVDCLRDHIDTVMEYLINVTTAPEF 147

  Fly   140 KPWELVD-NAKTVVNQLNAVSTEE-RAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQ 202
            :.||:.| ..:..:::..|..|.: ..||.:|.||::|.|.||:|.|.|::|::::|.:..:|..
Zfish   148 RAWEVSDLTGRVNLDKKLAKQTPQIGVIEDLHAAAYKNALSNSLYCPDFKIGQITTEQMHTFVQN 212

  Fly   203 TFAAGRAAVVGVGIDNNTLAGFA-QTLQFPSG-GSKAASANWYGGDARKDTSGHRAVVAVAGQGA 265
            .|.:.|.|:||:|:|::.|.... |.|...|| |:..:.|.:.||:.|..|........||.:||
Zfish   213 NFTSARMALVGLGVDHDMLKQVGEQFLNIRSGAGTVGSKALYRGGEVRHQTGAGLVHALVAIEGA 277

  Fly   266 AASNHKEALAFAILEQALGAKAATKRGTSA-GLFGEAVNCAGGVGASVKAVNASYSDAGLFGF-- 327
            :|:: .||.||::|:..|||....|||:|: ....:|::....:.....|.||:|:|:||||.  
Zfish   278 SATS-AEATAFSVLQHVLGAGPRVKRGSSSTSTLTQAISKVTALPFDASAFNANYTDSGLFGLYT 341

  Fly   328 VVSADS-KDIGKTVEFLVRGLKSASVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRN 391
            :..|:: .|:.|.....|..:...:::..|:::.|..|.|..:....|..||:..||........
Zfish   342 ICQANAVNDVIKAAVGQVNAIAQGNLAAADLSKAKNQLTADYLMSIESSEGLMDVIGTHVLSEGT 406

  Fly   392 VLEADALLGAIDGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDL 439
            ....:|:...|:.:|.:.|...|||..|.|..:.:.|:|.|.|:..::
Zfish   407 YHTPEAVTQKINAVSSADVVNVAKKFMSGKKTMASSGNLVNTPFVDEI 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UQCR-C2NP_001261955.1 PqqL 22..417 CDD:223685 128/404 (32%)
Peptidase_M16 41..185 CDD:279066 55/146 (38%)
Peptidase_M16_C 190..364 CDD:282978 53/179 (30%)
uqcrc2bNP_001001589.1 PqqL 39..432 CDD:223685 127/393 (32%)
Peptidase_M16 49..195 CDD:279066 54/145 (37%)
Peptidase_M16_C 201..379 CDD:282978 53/178 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7202
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37764
Inparanoid 1 1.050 206 1.000 Inparanoid score I3691
OMA 1 1.010 - - QHG51844
OrthoDB 1 1.010 - - D1000258at2759
OrthoFinder 1 1.000 - - FOG0003081
OrthoInspector 1 1.000 - - otm24262
orthoMCL 1 0.900 - - OOG6_103720
Panther 1 1.100 - - LDO PTHR11851
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3910
SonicParanoid 1 1.000 - - X5219
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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