DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn12 and rpn12

DIOPT Version :9

Sequence 1:NP_648904.1 Gene:Rpn12 / 39845 FlyBaseID:FBgn0028693 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_596750.2 Gene:rpn12 / 2540025 PomBaseID:SPBC16G5.01 Length:270 Species:Schizosaccharomyces pombe


Alignment Length:266 Identity:83/266 - (31%)
Similarity:131/266 - (49%) Gaps:42/266 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CGQLLDQLKVALVKM-AFLPTDGNDAQSSKKQLILARSVLEVAVEHSVLSKDLLAFERYMAQLKC 88
            |.:.|.:|||.|.|. .|:||      |.|::...||:|.|..|..|:.:.|:.:|.||.:|:..
pombe    21 CKKELLKLKVELAKQNLFVPT------SDKEKASFARNVFEYGVLVSIQTCDIESFARYASQVIP 79

  Fly    89 YYYDYAKIIGESESKYKLLGLNLLYLLSGNRVSDFHTELELL-SVDVIQHNQFIRPILALEQYIM 152
            :|:|  .::..|.... :.|||||||||.||:::|||.||.: ...:.:.:.::..:::|||.:|
pombe    80 FYHD--SLVPSSRMGL-VTGLNLLYLLSENRIAEFHTALESVPDKSLFERDPYVEWVISLEQNVM 141

  Fly   153 EGRYNKIFQAKSTVPVEVYSYFMDLLLETVRDEIGACIEKSYDKISAKDAAKRLNLRVPDEIKAF 217
            ||.::|:.....:.....:||||.:::..||:||..|.||.|.:|...:|...|.|....|.:..
pombe   142 EGAFDKVASMIRSCNFPEFSYFMKIVMSMVRNEIATCAEKVYSEIPLSNATSLLYLENTKETEKL 206

  Fly   218 GAKRQWKLEASGDYSFTDRSVKPKE----------LLPSEELAE--------------QVLSYAR 258
            ..:|.|.:.....|.       |||          |:..|:..|              |:|||..
pombe   207 AEERGWDIRDGVIYF-------PKEANALETEDGMLIDEEDELELPPTASKHTISSIRQLLSYTS 264

  Fly   259 DLEMIV 264
            :||.||
pombe   265 ELEQIV 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn12NP_648904.1 CSN8_PSD8_EIF3K 119..230 CDD:287089 32/111 (29%)
rpn12NP_596750.2 CSN8_PSD8_EIF3K 93..223 CDD:287089 43/137 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 84 1.000 Domainoid score I2224
eggNOG 1 0.900 - - E1_KOG3151
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37686
Inparanoid 1 1.050 111 1.000 Inparanoid score I1570
OMA 1 1.010 - - QHG53806
OrthoFinder 1 1.000 - - FOG0003512
OrthoInspector 1 1.000 - - otm47077
orthoMCL 1 0.900 - - OOG6_102164
Panther 1 1.100 - - LDO PTHR12387
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1201
SonicParanoid 1 1.000 - - X2884
TreeFam 1 0.960 - -
1413.860

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