DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn12 and Rpn12

DIOPT Version :10

Sequence 1:NP_648904.1 Gene:Rpn12 / 39845 FlyBaseID:FBgn0028693 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_312329.5 Gene:Rpn12 / 1273362 VectorBaseID:AGAMI1_006709 Length:338 Species:Anopheles gambiae


Alignment Length:264 Identity:157/264 - (59%)
Similarity:211/264 - (79%) Gaps:2/264 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANVESLYKELTAEWSKRPPNTVKCGQLLDQLKVALVKMAFLPTDGNDAQSSKKQLILARSVLEV 65
            |.:..:|||:|..||:|.|.|...||.:||:|||||..|:::|| || ||:::::|::||.:||:
Mosquito    77 MESTVALYKQLKTEWTKSPINLKLCGTILDKLKVALAGMSYIPT-GN-AQANQQELLIARDILEI 139

  Fly    66 AVEHSVLSKDLLAFERYMAQLKCYYYDYAKIIGESESKYKLLGLNLLYLLSGNRVSDFHTELELL 130
            .||:|:.:|::.|||||:.|||.:||||..:||||::||:|||||||:|||.|||::||||||||
Mosquito   140 GVEYSIATKNIPAFERYILQLKWFYYDYNTLIGESKNKYQLLGLNLLFLLSQNRVAEFHTELELL 204

  Fly   131 SVDVIQHNQFIRPILALEQYIMEGRYNKIFQAKSTVPVEVYSYFMDLLLETVRDEIGACIEKSYD 195
            ..|:||.|.|||..||||||:||||||||||||..||.|.|::|:|:||:|||:|||||:|.||:
Mosquito   205 PADIIQTNAFIRHPLALEQYLMEGRYNKIFQAKGNVPAESYNFFIDILLQTVRNEIGACLESSYE 269

  Fly   196 KISAKDAAKRLNLRVPDEIKAFGAKRQWKLEASGDYSFTDRSVKPKELLPSEELAEQVLSYARDL 260
            :||.::|||||||:..:|:|.||.|:.|||...|.|.|.:...||||.:||:|||||.:.|||:|
Mosquito   270 RISLQEAAKRLNLKSKEEVKQFGEKKAWKLSPDGFYHFVNELAKPKEPIPSQELAEQAIMYAREL 334

  Fly   261 EMIV 264
            ||||
Mosquito   335 EMIV 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn12NP_648904.1 CSN8_PSD8_EIF3K 119..229 CDD:462954 71/109 (65%)
Rpn12XP_312329.5 None

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