| Sequence 1: | NP_001261954.1 | Gene: | Smn / 39844 | FlyBaseID: | FBgn0036641 | Length: | 226 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_571266.1 | Gene: | smn1 / 30432 | ZFINID: | ZDB-GENE-990715-16 | Length: | 281 | Species: | Danio rerio |
| Alignment Length: | 273 | Identity: | 78/273 - (28%) |
|---|---|---|---|
| Similarity: | 123/273 - (45%) | Gaps: | 56/273 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SDETNAAVWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGGATSPE 66
Fly 67 PVSFKVGDYARATY-VDGVDYEGAVVSINEEKGTCVLRYLGYENEQEVLLVDLL---PSWG---- 123
Fly 124 KRVRREQFLIAKKDEDEQLSRPKASAGSH-SKT-----PKS--------------------SRRS 162
Fly 163 RISGGL---------VMPPM-PPVPPMIVGQGDGAEQDFVAMLTAWYMSGYYTGLY----QGKKE 213
Fly 214 ASTTSGKKKTPKK 226 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Smn | NP_001261954.1 | SMN | 2..215 | CDD:283622 | 74/260 (28%) |
| TUDOR | 68..122 | CDD:295375 | 24/57 (42%) | ||
| smn1 | NP_571266.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..20 | 2/2 (100%) | |
| SMN | 16..281 | CDD:283622 | 77/271 (28%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 42..77 | 5/36 (14%) | |||
| TUDOR | 79..136 | CDD:197660 | 23/56 (41%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 145..242 | 19/97 (20%) | |||
| P2 (binding site for SNRPB). /evidence=ECO:0000250 | 225..252 | 11/27 (41%) | |||
| Required for interaction with SYNCRIP. /evidence=ECO:0000250 | 264..279 | 7/17 (41%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C170588226 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4327 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 82 | 1.000 | Inparanoid score | I5184 |
| OMA | 1 | 1.010 | - | - | QHG47795 | |
| OrthoDB | 1 | 1.010 | - | - | D1316275at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0006496 | |
| OrthoInspector | 1 | 1.000 | - | - | oto40298 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_108123 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR13681 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3285 |
| SonicParanoid | 1 | 1.000 | - | - | X4739 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 14 | 13.800 | |||||