powered by:
Protein Alignment Smn and Smndc1
DIOPT Version :9
Sequence 1: | NP_001261954.1 |
Gene: | Smn / 39844 |
FlyBaseID: | FBgn0036641 |
Length: | 226 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001020571.1 |
Gene: | Smndc1 / 287768 |
RGDID: | 1309151 |
Length: | 238 |
Species: | Rattus norvegicus |
Alignment Length: | 181 |
Identity: | 36/181 - (19%) |
Similarity: | 74/181 - (40%) |
Gaps: | 51/181 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGGATSPEPV-SFKVGDYARA 78
|.|...|.:.|.::.|:.:.::: ::::....|.:|. |:||||...|
Rat 35 LKKDLQEVIELTKDLLSTQPSET------------------LTSSDSFASTQPTHSWKVGDKCMA 81
Fly 79 TY-VDGVDYEGAVVSINEEKGTCVLRYLGYENEQEVLLVDLLP----------SWGKRVRREQFL 132
.: .||..||..:..|:||.||..:.:..|.|.:...|::|.| |..|.:.:::.:
Rat 82 VWSEDGQCYEAEIEEIDEENGTAAITFAVYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMI 146
Fly 133 IAKKD--------------------EDEQLSRPKASAGSHSKTPKSS-RRS 162
..::: ||:::...:.:..::||..|.. :||
Rat 147 AQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKKGQVKRS 197
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D539238at33208 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
Return to query results.
Submit another query.