DRSC/TRiP Functional Genomics Resources

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Protein Alignment nxf2 and nxf1a

DIOPT Version :10

Sequence 1:NP_524111.3 Gene:nxf2 / 39843 FlyBaseID:FBgn0036640 Length:841 Species:Drosophila melanogaster
Sequence 2:XP_073777740.1 Gene:nxf1a / 751719 ZFINID:ZDB-GENE-060825-299 Length:659 Species:Danio rerio


Alignment Length:549 Identity:121/549 - (22%)
Similarity:233/549 - (42%) Gaps:109/549 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 CYYKYINTEHVFLVR-----NCFDQ---IAHLVNNCNLEMT----IPTGDRIFRYYLR-----MN 407
            |:.:.::...|.|.:     ..:|:   :..|.|.|.:..|    ...||:: .:||.     ..
Zfish   150 CFLQLLDASRVPLKQPIPHGKKYDKRWLLTSLQNLCPIAFTPLHYTTEGDKV-HFYLEDTTTASA 213

  Fly   408 VSTVKQHHVDPE-ECIQKAVSQCYV-----AQNRMLNLE--------RFHSRECLKDVMVSLSSP 458
            :|.:.:..:|.: :.:...::.||.     ::.|:.:||        ||...:...|:....:.|
Zfish   214 LSKLSRRILDSDGQRVVVLMNSCYFPPFLKSELRLEDLELLKLCLSKRFDDSQKSLDLTSIRTDP 278

  Fly   459 KILTY-VLSVASRKFMTTCSE---------------IRLCHNKVLVLDG-AHVLGMMGCLRAVDL 506
            ::::: |..:.:||   .|.:               :.|..||:..||| ..::.....|::::|
Zfish   279 ELVSHNVDIILNRK---NCMQAVIKIIQESIPELLSLNLSKNKLYKLDGLTELVNKAPNLQSLNL 340

  Fly   507 SHNWVQDLSSIHSLGNLPLKSLVLHGNKLCRNYRLPSEYVRAVKEVFPQLTTLDG--------VD 563
            |.|.::....:..:....|..|.|.||.||..::..:.|:.||::.||:|..|||        .:
Zfish   341 SCNELKSHCELDKVKGFRLVELCLDGNPLCDRFKDQTTYISAVQKCFPRLLRLDGHVLSLPICFE 405

  Fly   564 LQTNPGQSLQK-NFLCDTGAYELVGAFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYNVVQN 627
            ::|:....|.| :.........|:..|||.|...:::.: |..|.:.|.|::.|:| | ...:.|
Zfish   406 VETSSNIPLCKGSHFVSNEIQGLIQRFLEQYYSIYDSGD-RQPLLEAYHESACFSL-C-LPSISN 467

  Fly   628 HQTPKILQRLSKYNRHARNLRN-KD---------YSKASDGVFFGCTYIVEILLQLPRVTHDFHS 682
            ....|:     .|.:::||::| ||         :::.:         :|..|.:||:..||.:|
Zfish   468 PSRYKL-----DYFKNSRNVKNIKDSPTRFRLLKHTRLT---------VVACLNELPKTQHDINS 518

  Fly   683 LQTDVMHYNGKGAVIYVAGLLRDEPPSTRNGHGSKTDIGGVLLGFSRQFVVTFDEANLGLGKRAR 747
            :..||..|........|:|:.::....:.:          :...|||.| ||....|.|      
Zfish   519 INVDVNAYASTLLAFTVSGVFKEVDDQSED----------LFKAFSRVF-VTVPAQNSG------ 566

  Fly   748 RLKIANERLHITNPSKTAIRNAFSVNFPDPSERQAEEDSLDVKDHKLL-LFQEVTGLISTWVTSI 811
             |.|.|:.|.:.|.:...|:.||:.  |..|...:....|.....::| .|.:::.:...|....
Zfish   567 -LCIVNDELFVRNTTMEEIQCAFTT--PTQSPSSSPVPILSAYQQEMLSAFSQMSEMNLQWSQKC 628

  Fly   812 VEEADWDFERALKLFIQKNADHEIPDLAF 840
            :|:..|||::|.::|.:..|...||:.||
Zfish   629 LEDNAWDFQQAAQIFAELQAHGMIPEAAF 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nxf2NP_524111.3 PPP1R42 <206..284 CDD:455733
leucine-rich repeat 434..474 CDD:275382 10/48 (21%)
leucine-rich repeat 475..500 CDD:275382 7/40 (18%)
leucine-rich repeat 501..524 CDD:275382 4/22 (18%)
leucine-rich repeat 525..555 CDD:275382 11/29 (38%)
TAP_C 779..841 CDD:197882 15/63 (24%)
nxf1aXP_073777740.1 None
Blue background indicates that the domain is not in the aligned region.

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