Sequence 1: | NP_524111.3 | Gene: | nxf2 / 39843 | FlyBaseID: | FBgn0036640 | Length: | 841 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_071336.1 | Gene: | NXF2 / 56001 | HGNCID: | 8072 | Length: | 626 | Species: | Homo sapiens |
Alignment Length: | 625 | Identity: | 141/625 - (22%) |
---|---|---|---|
Similarity: | 260/625 - (41%) | Gaps: | 108/625 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 267 PANIKSLESNFELVDGKPFNMLHK----IFSPLDVEIDLEV-----DGARIDTNNMWKLPEFENS 322
Fly 323 Q--------HWHAFMIPDPSHEFNQEVFFDFFFIRLDPT-LSN---------FYPCYYKYINTEH 369
Fly 370 VFLVRNCFDQIAHLVNNCNLEMTIPTGDRIFRYYLRMNVSTVK---QHHVDP--EECIQKAVSQC 429
Fly 430 YVAQNRMLNLE--RFHSRECLKDVMVSLSSPKILTYVLSVASRKFMTTCSEIRLCHNKVLVLDG- 491
Fly 492 AHVLGMMGCLRAVDLSHNWVQDLSSIHSLGNLPLKSLVLHGNKLCRNYRLPSEYVRAVKEVFPQL 556
Fly 557 TTLDG--------VDLQTNPG-QSLQKNFLCDTGAYELVGAFLENYLREFENDEFRHNLYKYYSE 612
Fly 613 NSIFTLTCNYNVVQNHQTPK--ILQRLSKYNRHARNLRN-KD-YSKASDGVFFGCTY--IVEILL 671
Fly 672 QLPRVTHDFHSLQTDVMHYNGKGAVIYVAGLLRDEPPSTRNGHGSKTDIGGVLLGFSRQFVVTFD 736
Fly 737 EANLGLGKRARRLKIANERLHITNPSKTAIRNAFSVNFPDPSERQAEEDSLDVKDHKLL-LFQEV 800
Fly 801 TGLISTWVTSIVEEADWDFERALKLFIQKNADHEIPDLAF 840 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nxf2 | NP_524111.3 | leucine-rich repeat | 434..474 | CDD:275382 | 9/41 (22%) |
leucine-rich repeat | 475..500 | CDD:275382 | 8/25 (32%) | ||
leucine-rich repeat | 501..524 | CDD:275382 | 3/22 (14%) | ||
leucine-rich repeat | 525..555 | CDD:275382 | 12/29 (41%) | ||
TAP_C | 779..841 | CDD:197882 | 14/63 (22%) | ||
NXF2 | NP_071336.1 | Tap-RNA_bind | 121..203 | CDD:312616 | 17/100 (17%) |
leucine-rich repeat | 229..271 | CDD:275382 | 9/41 (22%) | ||
LRR_8 | 270..332 | CDD:316378 | 17/62 (27%) | ||
LRR 1 | 271..296 | 8/25 (32%) | |||
leucine-rich repeat | 272..297 | CDD:275382 | 8/25 (32%) | ||
LRR 2 | 297..320 | 3/22 (14%) | |||
leucine-rich repeat | 298..321 | CDD:275382 | 3/22 (14%) | ||
LRR 3 | 321..348 | 11/26 (42%) | |||
leucine-rich repeat | 322..352 | CDD:275382 | 12/29 (41%) | ||
LRR 4 | 349..376 | 8/26 (31%) | |||
NTF2_like | 391..543 | CDD:324324 | 45/180 (25%) | ||
TAP_C | 570..623 | CDD:197882 | 11/53 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165147831 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3763 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D442228at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000862 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.750 |