DRSC/TRiP Functional Genomics Resources

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Protein Alignment nxf2 and NXF1

DIOPT Version :10

Sequence 1:NP_524111.3 Gene:nxf2 / 39843 FlyBaseID:FBgn0036640 Length:841 Species:Drosophila melanogaster
Sequence 2:XP_047282201.1 Gene:NXF1 / 10482 HGNCID:8071 Length:635 Species:Homo sapiens


Alignment Length:525 Identity:122/525 - (23%)
Similarity:222/525 - (42%) Gaps:95/525 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 FYPCYYKYINTEHVFLVRNCFDQIAHLVNNCNLEMTIPTGDRIFRYYLRMNV---STVKQH---- 414
            |.|..:.|.||...|.|.:.  ..|..:...|.::.    ||..|   |:::   |:...|    
Human   163 FTPIEFHYENTRAQFFVEDA--STASALKAVNYKIL----DRENR---RISIIINSSAPPHTILN 218

  Fly   415 HVDPE--ECIQKAVSQCYVAQNRMLNLERFHSRECL--KDVMVSLSSPKILTYVLSVASRKFMTT 475
            .:.||  |.::..:|:.|....:.|:|:...|...|  :::.|.|:....:...|.:........
Human   219 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPEL 283

  Fly   476 CSEIRLCHNKVLVLDG-AHVLGMMGCLRAVDLSHNWVQDLSSIHSLGNLPLKSLVLHGNKLCRNY 539
            .| :.|.:|::..||. :.::.....|:.::||.|.::....:..:..|.|:.|.|.||.||..:
Human   284 LS-LNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTF 347

  Fly   540 RLPSEYVRAVKEVFPQLTTLDGVDL-----------QTNPGQSLQKNFLCDTGAY-------ELV 586
            |..|.|:.|::|.||:|..|||.:|           .|.|.        | .|:|       .||
Human   348 RDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAPTTLPP--------C-KGSYFGTENLKSLV 403

  Fly   587 GAFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYNVVQNHQTPKILQRLSKYNRHARNLRN-K 650
            ..||:.|...:::.: |..|...|.:.:..:|:..: :.||    .....|::|.:.:||::. |
Human   404 LHFLQQYYAIYDSGD-RQGLLDAYHDGACCSLSIPF-IPQN----PARSSLAEYFKDSRNVKKLK 462

  Fly   651 D---------YSKASDGVFFGCTYIVEILLQLPRVTHDFHSLQTDVMHYNGKGAVIYVAGLLRDE 706
            |         :::.:         :|..|.:||:..||.:|...|:...........|.|:.::.
Human   463 DPTLRFRLLKHTRLN---------VVAFLNELPKTQHDVNSFVVDISAQTSTLLCFSVNGVFKEV 518

  Fly   707 PPSTRNGHGSKTDIGGVLLGFSRQFVVTFDEANLGLGKRARRLKIANERLHITNPSKTAIRNAFS 771
            ...:|:.          |..|:|.|:.. ..:|.|       |.|.|:.|.:.|.|...|:.||:
Human   519 DGKSRDS----------LRAFTRTFIAV-PASNSG-------LCIVNDELFVRNASSEEIQRAFA 565

  Fly   772 VNFPDPSERQAEEDSLDVKDHKLL-LFQEVTGLISTWVTSIVEEADWDFERALKLFIQKNADHEI 835
            :..|.||  .:...:|..:..::| .|...:|:...|....:::.:||:.|:.:.|....|..||
Human   566 MPAPTPS--SSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEI 628

  Fly   836 PDLAF 840
            |::||
Human   629 PEVAF 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nxf2NP_524111.3 PPP1R42 <206..284 CDD:455733
leucine-rich repeat 434..474 CDD:275382 7/41 (17%)
leucine-rich repeat 475..500 CDD:275382 5/25 (20%)
leucine-rich repeat 501..524 CDD:275382 4/22 (18%)
leucine-rich repeat 525..555 CDD:275382 13/29 (45%)
TAP_C 779..841 CDD:197882 15/63 (24%)
NXF1XP_047282201.1 Tap-RNA_bind 135..214 CDD:462696 14/59 (24%)
leucine-rich repeat 240..282 CDD:275382 7/41 (17%)
LRR <279..>405 CDD:443914 36/135 (27%)
leucine-rich repeat 283..308 CDD:275382 5/25 (20%)
leucine-rich repeat 309..332 CDD:275382 4/22 (18%)
leucine-rich repeat 333..363 CDD:275382 13/29 (45%)
NTF2 398..554 CDD:238403 38/188 (20%)
TAP_C 572..634 CDD:197882 16/64 (25%)
Blue background indicates that the domain is not in the aligned region.

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