DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mipp1 and AT1G09870

DIOPT Version :10

Sequence 1:NP_524109.2 Gene:Mipp1 / 39841 FlyBaseID:FBgn0026061 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_563856.1 Gene:AT1G09870 / 837519 AraportID:AT1G09870 Length:487 Species:Arabidopsis thaliana


Alignment Length:473 Identity:115/473 - (24%)
Similarity:190/473 - (40%) Gaps:87/473 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLLPLVAIAQDDYCFS-KDTSRLQTRQFSSKTAYQ-IVKGTDIDKQYLVPGCQPQKMWIFHRHG 68
            ::||.|..::|.|..|. :......||..:||...| :::|:::..:     |.|..:.:..|||
plant     8 IILLCLFVVSQADQGFDVRHHLSTVTRYSTSKDVTQNLIEGSNVPSE-----CTPIHLNLVARHG 67

  Fly    69 TRLPKKSMINK----ASRVAEL-RDLIINNYQVARTKPETDALCQTDLIA--IKLWK--WNSSIT 124
            ||.|.|..:.:    |.|..|| ||      ..||..|       :|.|.  :..||  |...: 
plant    68 TRSPTKKRLRELESLAGRFKELVRD------AEARKLP-------SDKIPGWLGQWKSPWEGKV- 118

  Fly   125 PDMEEYLTAQGYEDLR-GTAKLYQ------RYYPTVLTANYNDTYYQFRHTDTQRTTESFKAFAE 182
                     :|.|.:| |..:|||      ..:|::...:|:...|..|.|...|.:.|..||..
plant   119 ---------KGGELIRQGEDELYQLGIRVRERFPSLFEEDYHPDVYTIRATQIPRASASAVAFGM 174

  Fly   183 GLFG-------SQNAAHPV--EIPKQDLLLRPYDYCSSFKNVNYKDEGSEYYKFHQSKLYNDTLA 238
            |||.       .:|.|..|  |....|..||.::.|.::|:.....|.:      ..||....|.
plant   175 GLFSEKGNLGPGRNRAFAVTSENRASDTKLRFFECCQNYKSYRKAKEPA------VDKLKEPVLN 233

  Fly   239 DISTRLGFLYTLE--EADIKLMYDMCRYEQA-WNVDRNSVWCGAFLPEQITVFEYLEDLKYYYGS 300
            .|:..:...|.|:  :.||..::.:|:.|.: .||...|  |..|.|.::.:.|:.:||:.:...
plant   234 KITASVAKRYDLKFTKQDISSLWFLCKQEASLLNVTNQS--CELFTPSEVALLEWTDDLEVFLLK 296

  Fly   301 GYGFPENAHLNCRLVQDLLTHLSNPVSPH-----------VVAHFGHSTGLLTLLTALGIQKDDI 354
            |||...|..:...|::|:|..:...:...           ....|.|:..::.....||:..|..
plant   297 GYGNSLNYKMGVPLLEDVLHSMEEAIKAREEKLPPGSYEKARLRFAHAETIVPFSCLLGLFLDGS 361

  Fly   355 ---KLRADNYDSL-----TSRRWKSSLIDPFAANFVAVKYDCPADLDREKVVFFL-NQQAVQLDW 410
               |::.:....|     .:|.::.|.:.||..|.:.|.|.|||:...:..|..| |:..:.:..
plant   362 EFEKIQKEKPLELPPQPPKTRDFRGSTMAPFGGNNILVLYSCPAESSPKYFVQVLHNEHPIAVPG 426

  Fly   411 C-SVGLCKWSDVLEKYKT 427
            | ....|...|...|..|
plant   427 CDGKDFCPLEDFKAKVVT 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mipp1NP_524109.2 HP_HAP_like 129..402 CDD:132717 74/311 (24%)
AT1G09870NP_563856.1 His_Phos_2 58..418 CDD:395259 95/390 (24%)

Return to query results.
Submit another query.