DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mipp1 and Mipp2

DIOPT Version :9

Sequence 1:NP_001287082.1 Gene:Mipp1 / 39841 FlyBaseID:FBgn0026061 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_511055.1 Gene:Mipp2 / 31544 FlyBaseID:FBgn0026060 Length:453 Species:Drosophila melanogaster


Alignment Length:471 Identity:141/471 - (29%)
Similarity:228/471 - (48%) Gaps:61/471 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LILLLLPL---VAIAQDDYCFSKDTSRLQTRQFSSKTAYQIVKGTD-IDKQYLVPGCQPQKMWIF 64
            |.||||..   |.::::..|...:.:.::.| .|:||.|:.:...| ...:|  .||.|.::|..
  Fly     8 LFLLLLHFFVGVTLSEEGECRRLNRADIEGR-LSTKTPYRAIANYDETPPKY--AGCHPTRIWTI 69

  Fly    65 HRHGTRLPKKSMINKA-SRVAELRDLIINNYQVARTKPETDALCQTDLIAIKLWKWNSSITPDME 128
            .|||||.|.:|:|.:| :|::|::..|::     :|||   .:|..:|..::.|.|......:.|
  Fly    70 IRHGTRNPSESVILQAQNRLSEIKKRILD-----QTKP---PICTAELEKLRQWHWMHLNATEDE 126

  Fly   129 EYLTAQGYEDLRGTAKLYQRYYPTVLTANYNDTYYQFRHTDTQRTTESFKAFAEGLFGSQNAAHP 193
            :.|.|:|.::|...|:..||.:|.:|...||..:|.|::|.||||.:|.::||.|||| ::..|.
  Fly   127 KLLVAEGEDELIELAERMQRRFPDLLPELYNPEWYYFKYTATQRTLKSAESFATGLFG-RHRIHT 190

  Fly   194 VEIP---KQDLLLRPYDYCSSFKN---------VNYKDEGSEYYKFHQSKLYNDTLADI--STRL 244
            |..|   .:|.:||.|..|..:|.         ||.:       :|.........:..:  ||||
  Fly   191 VRYPPPLHEDPVLRFYKGCGKWKTDVDKNPETLVNAR-------RFLAEPQMQSAVEQVRSSTRL 248

  Fly   245 GFLYTLEEADIKLMYDMCRYEQAWNVDRN---------SVWCGAFLPEQITVFEYLEDLKYYYGS 300
            .   .|:..|::|||.:|.:|.||:..|:         ||||..|....:...|:.|||:||:..
  Fly   249 P---DLQPEDVQLMYTVCAFETAWHRPRHDSGSKSSYESVWCNFFDVAALEALEFFEDLEYYWND 310

  Fly   301 GYGFPENAHLNCRLVQDLLTHLSNPVS-----PHVVAHFGHSTGLLTLLTALGIQKDDIKLRADN 360
            |||:.....:.|..:.|:...:|:...     .:...:|.||..||.||..||:.:|:..|...:
  Fly   311 GYGYELTHRIACPAIADMFAAISSSEETRQRRANATLYFTHSGTLLKLLAHLGLARDNKPLTHKH 375

  Fly   361 YDSLTSRRWKSSLIDPFAANFVAVKYDCPADLDREKVVFFLNQQAVQLDWC--SVGLCKWSDVLE 423
            :.|  .|.|::|.||.||.|...::|||  |....:|:....::.|:|..|  ...||..:.:..
  Fly   376 FAS--ERLWRTSQIDAFATNLAFLRYDC--DKGNPQVLVLHQERVVRLPGCPQDKDLCPLATLRR 436

  Fly   424 KYKTIADADCGEYYCR 439
            .|....|....|..||
  Fly   437 IYANSVDHCDREKMCR 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mipp1NP_001287082.1 HP_HAP_like 129..402 CDD:132717 93/300 (31%)
Mipp2NP_511055.1 HP 68..351 CDD:299704 89/301 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468926
Domainoid 1 1.000 93 1.000 Domainoid score I2558
eggNOG 1 0.900 - - E1_KOG1382
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I1990
Isobase 1 0.950 - 0 Normalized mean entropy S5846
OMA 1 1.010 - - QHG55377
OrthoDB 1 1.010 - - D1046588at2759
OrthoFinder 1 1.000 - - FOG0004136
OrthoInspector 1 1.000 - - mtm6348
orthoMCL 1 0.900 - - OOG6_101372
Panther 1 1.100 - - P PTHR20963
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3401
1312.760

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