DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG1

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_024307909.1 Gene:ABCG1 / 9619 HGNCID:73 Length:786 Species:Homo sapiens


Alignment Length:651 Identity:189/651 - (29%)
Similarity:321/651 - (49%) Gaps:98/651 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RSYSKW----SPTEQGATLVWRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKT 115
            |:|. |    .|.|:|                    .|.::...:|....|.|:|:||.||:||:
Human   190 RAYG-WGFPGDPMEEG--------------------YKTLLKGISGKFNSGELVAIMGPSGAGKS 233

  Fly   116 TLMSTLA-FRQPAGTVVQGDILING--RRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRL 177
            |||:.|| :|:   |.::|.:||||  |.:..| .::|.|:.|||:.|..|||.|.:...|||:|
Human   234 TLMNILAGYRE---TGMKGAVLINGLPRDLRCF-RKVSCYIMQDDMLLPHLTVQEAMMVSAHLKL 294

  Fly   178 DRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEP 242
            ..:  .|.||.::||:|...||||.|.||.||      ||||:|||||.|:||:|||.::|.|||
Human   295 QEK--DEGRREMVKEILTALGLLSCANTRTGS------LSGGQRKRLAIALELVNNPPVMFFDEP 351

  Fly   243 TTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFF 307
            |:||||.|..|:|:.:..|||.|.:|:|||||||::||:.|:.:.:|:.|:..:.|...:.:.:.
Human   352 TSGLDSASCFQVVSLMKGLAQGGRSIICTIHQPSAKLFELFDQLYVLSQGQCVYRGKVCNLVPYL 416

  Fly   308 ANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSA--QHLCDQFAVSSAAKQRDMLVNLEIHMAQ 370
            .:.|..||..:|||||::.|.:.:.|.:.:....|  :.:||      :..:||:..:.|::   
Human   417 RDLGLNCPTYHNPADFVMEVASGEYGDQNSRLVRAVREGMCD------SDHKRDLGGDAEVN--- 472

  Fly   371 SGNFPF-----DTEVESFRGVAWYKR------------------FHVVWLRASLTLLRDPTIQWL 412
                ||     ..||:..:.:...::                  |.:::.|..|:::||..:..|
Human   473 ----PFLWHRPSEEVKQTKRLKGLRKDSSSMEGCHSFSASCLTQFCILFKRTFLSIMRDSVLTHL 533

  Fly   413 RFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETR 477
            |....|.:..:||..:.|....:: .|.:..|.||..:....:..:...:..||....:|:||..
Human   534 RITSHIGIGLLIGLLYLGIGNEAK-KVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMGVFLREHL 597

  Fly   478 SGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCF 542
            :..||...||.|..:|.:|..|:.|:.:..|.||:|...|....|.:.|....:...||.:.|..
Human   598 NYWYSLKAYYLAKTMADVPFQIMFPVAYCSIVYWMTSQPSDAVRFVLFAALGTMTSLVAQSLGLL 662

  Fly   543 FSTAFNSVPLAMAYLVPLDYI-FMITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQ 606
            ...|..|:.:| .::.|:..| .::.||.|:..:::|....|..::|::.|..|.:..:.:.   
Human   663 IGAASTSLQVA-TFVGPVTAIPVLLFSGFFVSFDTIPTYLQWMSYISYVRYGFEGVILSIYG--- 723

  Fly   607 NITCFQESADLPC-------FHTGQDVLDKYSFNESNVYRNLLAMVGLYF-GFHLLGYYCLWRRA 663
                 .:..||.|       |...:.:|.:.....:.:|.:.: ::|::| ...|:.|:.|..:.
Human   724 -----LDREDLHCDIDETCHFQKSEAILRELDVENAKLYLDFI-VLGIFFISLRLIAYFVLRYKI 782

  Fly   664 R 664
            |
Human   783 R 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 99/234 (42%)
3a01204 67..665 CDD:273361 183/635 (29%)
ABC2_membrane 395..600 CDD:279410 51/205 (25%)
ABCG1XP_024307909.1 3a01204 202..786 CDD:273361 185/638 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141413
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.750

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