DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and yhdZ

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_417737.1 Gene:yhdZ / 947763 ECOCYCID:EG12837 Length:252 Species:Escherichia coli


Alignment Length:250 Identity:68/250 - (27%)
Similarity:115/250 - (46%) Gaps:36/250 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 IINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHRIS---- 150
            ::.|....:|||..:.|.|.|||||:|.:..:...:..   .||.|:::|..:...:..|.    
E. coli    27 VLKNINLTVQPGERIVLCGPSGSGKSTTIRCINHLEEH---QQGRIVVDGIELNEDIRNIERVRQ 88

  Fly   151 --GYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDK 213
              |.|:|.......||||::.. :|.:.: |::.|:|...:....|||..:...|....|.    
E. coli    89 EVGMVFQHFNLFPHLTVLQNCT-LAPIWV-RKMPKKEAEDLAVHYLERVRIAEHAHKFPGQ---- 147

  Fly   214 KVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQ 278
              :|||:::|:|.|..|...|.|:..||||:.||....::::.|:..|||.|.|:||..|:.   
E. coli   148 --ISGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEM--- 207

  Fly   279 LFDNF-----NNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVL 328
               .|     :.|:.:..|.:....:|.   .|||:     |::.....||..|:
E. coli   208 ---GFARTVADRVIFMDRGEIVEQAAPD---EFFAH-----PKSERTRAFLSQVI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 68/249 (27%)
yhdZNP_417737.1 GlnQ 12..250 CDD:440743 67/247 (27%)

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