DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG2

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001335914.1 Gene:ABCG2 / 9429 HGNCID:74 Length:655 Species:Homo sapiens


Alignment Length:636 Identity:195/636 - (30%)
Similarity:317/636 - (49%) Gaps:67/636 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QGATLVWRDLCVYTNVGGSG------QRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAF 123
            :||.|.:.::|....: .||      ...|.|::|..|.::|| |.|::|.:|.||::|:..||.
Human    33 EGAVLSFHNICYRVKL-KSGFLPCRKPVEKEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAA 95

  Fly   124 RQ-PAGTVVQGDILINGRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERR 187
            |: |:|  :.||:||||..........||||.|||:.:|:|||.|:|.|.|.|||...::..|:.
Human    96 RKDPSG--LSGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKN 158

  Fly   188 LIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQ 252
            ..|..:::..||...|.:::|:...:.| |||||||.:..:||:.:|.|||.|||||||||.:|.
Human   159 ERINRVIQELGLDKVADSKVGTQFIRGV-SGGERKRTSIGMELITDPSILFLDEPTTGLDSSTAN 222

  Fly   253 QLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEA 317
            .::..|..::::|.||:.:||||...:|..|:::.|||.||:.|.|..|.||.:|.:.||:| ||
Human   223 AVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHC-EA 286

  Fly   318 Y-NPADFLIGVLATDPG---------------YEQASQRS--AQHLCDQFAVSSAAKQRDMLVNL 364
            | |||||.:.::..|..               .|.:.|..  .:.|.:.:..||..|:    ...
Human   287 YNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSKQDKPLIEKLAEIYVNSSFYKE----TKA 347

  Fly   365 EIHMAQSGNFPFDTEVESFRGVAWYKRF--HVVWL--RASLTLLRDPTIQWLRFIQKIAMAFIIG 425
            |:|....|.  ...::..|:.:::...|  .:.|:  |:...||.:|.....:.|..:.:..:||
Human   348 ELHQLSGGE--KKKKITVFKEISYTTSFCHQLRWVSKRSFKNLLGNPQASIAQIIVTVVLGLVIG 410

  Fly   426 ACFAGTTEPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAAN 490
            |.:.|....| .|:|...|.||.:.:...:..: |.:.||.....||:.|..||.|....|:...
Human   411 AIYFGLKNDS-TGIQNRAGVLFFLTTNQCFSSV-SAVELFVVEKKLFIHEYISGYYRVSSYFLGK 473

  Fly   491 ILA-LLPGMIIEPLIFVIICYWLTGLRSTFYAFGVTAMCVVLV------MNVATACGCFFSTAFN 548
            :|: |||..::..:||..|.|::.||:....||.|....:::|      |.:|.|.|       .
Human   474 LLSDLLPMRMLPSIIFTCIVYFMLGLKPKADAFFVMMFTLMMVAYSASSMALAIAAG-------Q 531

  Fly   549 SVPLAMAYLVPLDYIF-MITSGIFIQVNSLPVAFW--WTQFLSWMLYANEAMTAAQWSGVQNITC 610
            ||......|:.:.::| ||.||:.  ||...:|.|  |.|:.|...|...|:...::.|......
Human   532 SVVSVATLLMTICFVFMMIFSGLL--VNLTTIASWLSWLQYFSIPRYGFTALQHNEFLGQNFCPG 594

  Fly   611 FQESADLPCFH---TGQDVLDKYSFNES--NVYRNLLAMVGLYFGFHLLGY 656
            ...:.:.||.:   ||::.|.|...:.|  .:::|.:|:..:...|..:.|
Human   595 LNATGNNPCNYATCTGEEYLVKQGIDLSPWGLWKNHVALACMIVIFLTIAY 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 94/238 (39%)
3a01204 67..665 CDD:273361 194/634 (31%)
ABC2_membrane 395..600 CDD:279410 61/216 (28%)
ABCG2NP_001335914.1 3a01204 55..649 CDD:273361 189/613 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 105 1.000 Domainoid score I6648
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.820

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