DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and PDR5

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_014796.3 Gene:PDR5 / 854324 SGDID:S000005679 Length:1511 Species:Saccharomyces cerevisiae


Alignment Length:722 Identity:197/722 - (27%)
Similarity:311/722 - (43%) Gaps:152/722 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQGATLVWRDLCVYTNVGGSGQRMKRIINNSTG 96
            |...|.|..|:.:.:|.|.|   .:|.:...::..|...||:||....:..   ..:||:||..|
Yeast   835 ERSDLSSDRKMLQESSEEES---DTYGEIGLSKSEAIFHWRNLCYEVQIKA---ETRRILNNVDG 893

  Fly    97 AIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHRISGYVYQDDLFLG 161
            .::||||.||||:||:|||||:..||.|...| |:.||||:||........|..||..|.||.|.
Yeast   894 WVKPGTLTALMGASGAGKTTLLDCLAERVTMG-VITGDILVNGIPRDKSFPRSIGYCQQQDLHLK 957

  Fly   162 SLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIG-SGDDKKVLSGGERKRLA 225
            :.||.|.|.|.|:||....||.||:...::|:::...:...|...:| :|:.   |:..:||||.
Yeast   958 TATVRESLRFSAYLRQPAEVSIEEKNRYVEEVIKILEMEKYADAVVGVAGEG---LNVEQRKRLT 1019

  Fly   226 FAVELLNNP-VILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLL 289
            ..|||...| :::|.||||:||||.:|..:...:.:||..|..|||||||||:.|...|:.::.:
Yeast  1020 IGVELTAKPKLLVFLDEPTSGLDSQTAWSICQLMKKLANHGQAILCTIHQPSAILMQEFDRLLFM 1084

  Fly   290 -ADGRVAFTG----SPQHALSFFANHG-YYCPEAYNPADFLIGVLATDPG------YEQASQRSA 342
             ..|:..:.|    ..:..:.:|.:|| :.||...|||::::.|:...||      |.:..:.|.
Yeast  1085 QRGGKTVYFGDLGEGCKTMIDYFESHGAHKCPADANPAEWMLEVVGAAPGSHANQDYYEVWRNSE 1149

  Fly   343 QHLCDQFAVSSAA--KQRDMLVNLEIHMAQ-----SGNFPFDTEVESFRGVAWYKRFHVVWLRAS 400
            ::.    ||.|..  .:|::.....|..|:     |.:..:.|::.|.|      .|...|    
Yeast  1150 EYR----AVQSELDWMERELPKKGSITAAEDKHEFSQSIIYQTKLVSIR------LFQQYW---- 1200

  Fly   401 LTLLRDPTIQWLRFIQKIAMAFIIGACF--AGTTEPSQLGVQAVQGALFIMISENTYHPMYSVL- 462
                |.|...|.:||..|.....||..|  |||   |..|:|....|:|          |::|: 
Yeast  1201 ----RSPDYLWSKFILTIFNQLFIGFTFFKAGT---SLQGLQNQMLAVF----------MFTVIF 1248

  Fly   463 -NLFPQGFPLFM--------RETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRS- 517
             .:..|..|.|:        ||..|..:|...:..|.|...:|..|:...|...|.|:..|..| 
Yeast  1249 NPILQQYLPSFVQQRDLYEARERPSRTFSWISFIFAQIFVEVPWNILAGTIAYFIYYYPIGFYSN 1313

  Fly   518 -------------------TFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYI 563
                               .||.: |.:|.::::             :||.|..:.|.|..|.:.
Yeast  1314 ASAAGQLHERGALFWLFSCAFYVY-VGSMGLLVI-------------SFNQVAESAANLASLLFT 1364

  Fly   564 FMIT-SGIFIQVNSLPVAFWWTQF-LSWMLYANEAMTAAQWSGVQN--ITC-------FQESADL 617
            ..:: .|:....:::| .||...: :|.:.|..:|:.|.   ||.|  :.|       |...:.:
Yeast  1365 MSLSFCGVMTTPSAMP-RFWIFMYRVSPLTYFIQALLAV---GVANVDVKCADYELLEFTPPSGM 1425

  Fly   618 PC--------------FHTGQDVLDKYSFNESNVYRNLLAMVG--------------LYFGF-HL 653
            .|              :.|.::..|..||.:.:...:.||.|.              .|..| ::
Yeast  1426 TCGQYMEPYLQLAKTGYLTDENATDTCSFCQISTTNDYLANVNSFYSERWRNYGIFICYIAFNYI 1490

  Fly   654 LGYYCLW 660
            .|.:..|
Yeast  1491 AGVFFYW 1497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 93/234 (40%)
3a01204 67..665 CDD:273361 189/687 (28%)
ABC2_membrane 395..600 CDD:279410 53/238 (22%)
PDR5NP_014796.3 ABC_trans_N 46..152 CDD:405234
3a01205 100..1503 CDD:273362 197/722 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341554
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13430
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
TreeFam 1 0.960 - -
54.800

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