DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and PDR15

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_010694.1 Gene:PDR15 / 852015 SGDID:S000002814 Length:1529 Species:Saccharomyces cerevisiae


Alignment Length:633 Identity:179/633 - (28%)
Similarity:284/633 - (44%) Gaps:94/633 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVGSTIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQGATLVWRDLCVYTNVGGSGQRMKRI 90
            |..:|.|...||.:.:.|..:|....|.|        ::..|...|||||....:.| |||  ||
Yeast   849 PDSATTEKKILDDSSEGSDSSSDNAGLGL--------SKSEAIFHWRDLCYDVPIKG-GQR--RI 902

  Fly    91 INNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHRISGYVYQ 155
            :||..|.::||||.||||:||:|||||:..||.|...| |:.|:|.::||.......|..||..|
Yeast   903 LNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERVTMG-VITGNIFVDGRLRDESFPRSIGYCQQ 966

  Fly   156 DDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIG-SGDDKKVLSGG 219
            .||.|.:.||.|.|.|.|:||....||.||:...::|:::...:...:...:| :|:.   |:..
Yeast   967 QDLHLKTATVRESLRFSAYLRQPSSVSIEEKNRYVEEVIKILEMQQYSDAVVGVAGEG---LNVE 1028

  Fly   220 ERKRLAFAVELLNNP-VILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNF 283
            :||||...|||...| :::|.||||:||||.:|......:.:||..|..|||||||||:.|...|
Yeast  1029 QRKRLTIGVELAARPKLLVFLDEPTSGLDSQTAWDTCQLMRKLATHGQAILCTIHQPSAILMQQF 1093

  Fly   284 NNVMLL-ADGRVAFTG----SPQHALSFFANHG-YYCPEAYNPADFLIGVLATDPG------YEQ 336
            :.::.| ..|:..:.|    ..:..:.:|.:.| :.||...|||::::.|:...||      |.:
Yeast  1094 DRLLFLQKGGQTVYFGDLGEGCKTMIDYFESKGAHKCPPDANPAEWMLEVVGAAPGSHATQDYNE 1158

  Fly   337 ASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRGVAWYKRFHVVWLRASL 401
            ..:.|.::...|          :.|..:|.::......|...|.:.|....:| :|.:|.:|...
Yeast  1159 VWRNSDEYKAVQ----------EELDWMEKNLPGRSKEPTAEEHKPFAASLYY-QFKMVTIRLFQ 1212

  Fly   402 TLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENTYHPMYSVL--NL 464
            ...|.|...|.:||..|.....||..|. ..:.|..|:|....::|          ||:|:  .:
Yeast  1213 QYWRSPDYLWSKFILTIFNQVFIGFTFF-KADRSLQGLQNQMLSIF----------MYTVIFNPI 1266

  Fly   465 FPQGFPLFM--------RETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRST--- 518
            ..|..|.|:        ||..|..:|...::.:.|:..:|..|:...|...|.|:..|..:.   
Yeast  1267 LQQYLPSFVQQRDLYEARERPSRTFSWLAFFLSQIIVEIPWNILAGTIAYCIYYYAVGFYANASA 1331

  Fly   519 ----------FYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMIT-SGIFI 572
                      |:.|.:.....:..|.:       ...:||.|....|::..|.:...:: .|:..
Yeast  1332 AGQLHERGALFWLFSIAFYVYIGSMGL-------LMISFNEVAETAAHMGTLLFTMALSFCGVMA 1389

  Fly   573 QVNSLPVAFWWTQF-LSWMLYANEAMTAAQWSGVQNITCFQESADLPC 619
            ....:| .||...: :|.:.|..:|:.|.   ||.|:       |:.|
Yeast  1390 TPKVMP-RFWIFMYRVSPLTYMIDALLAL---GVANV-------DVKC 1426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 170/592 (29%)
PDR15NP_010694.1 ABC_trans_N 47..162 CDD:464194
3a01205 110..1518 CDD:273362 179/633 (28%)
Blue background indicates that the domain is not in the aligned region.

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