DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and SNQ2

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_010294.1 Gene:SNQ2 / 851574 SGDID:S000002418 Length:1501 Species:Saccharomyces cerevisiae


Alignment Length:754 Identity:192/754 - (25%)
Similarity:323/754 - (42%) Gaps:189/754 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SKRI----DVEAPERVEQHELQVMPVGSTIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQG 66
            |||.    |.|:|:.|.                .:|:..:.|..:|....      ..:...|..
Yeast   808 SKRFIAHADEESPDNVN----------------DIDAKEQFSSESSGAND------EVFDDLEAK 850

  Fly    67 ATLVWRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVV 131
            ...:|:|:| :|.....|:||  :::|.:|...|||:.||||.||:|||||::|||.|...  ::
Yeast   851 GVFIWKDVC-FTIPYEGGKRM--LLDNVSGYCIPGTMTALMGESGAGKTTLLNTLAQRNVG--II 910

  Fly   132 QGDILINGRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLER 196
            .||:|:|||.|.....|.:|||.|.|:.:..|||.|.|.|.|.:|..:.:...|:...:::::..
Yeast   911 TGDMLVNGRPIDASFERRTGYVQQQDIHIAELTVRESLQFSARMRRPQHLPDSEKMDYVEKIIRV 975

  Fly   197 TGLLSAAQT---RIGSGDDKKVLSGGERKRLAFAVELLNNP-VILFCDEPTTGLDSYSAQQLVAT 257
            .|:...|:.   .:|.|     |:..:||:|:..|||:..| ::||.||||:||||.|:..::..
Yeast   976 LGMEEYAEALVGEVGCG-----LNVEQRKKLSIGVELVAKPDLLLFLDEPTSGLDSQSSWAIIQL 1035

  Fly   258 LYELAQKGTTILCTIHQPSSQLFDNFNNVMLL-ADGRVAFTG----SPQHALSFFANHG-YYCPE 316
            |.:|::.|.:|||||||||:.||:.|:.::|| ..|:..:.|    :....|::|..:| ..|..
Yeast  1036 LRKLSKAGQSILCTIHQPSATLFEEFDRLLLLRKGGQTVYFGDIGKNSATILNYFERNGARKCDS 1100

  Fly   317 AYNPADFL---IGVLATDPGYEQASQRSAQHLCDQFAVS-----SAAKQRDMLVNLEIHMAQS-- 371
            :.|||:::   ||..||      ||.:...|  :::..|     :..|.:|::.:|.....:|  
Yeast  1101 SENPAEYILEAIGAGAT------ASVKEDWH--EKWLNSVEFEQTKEKVQDLINDLSKQETKSEV 1157

  Fly   372 GNFPFDTEVESFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTT---- 432
            |:.|      |....::..:|..|.:|.|.:..|.     |.:|....|..::|..:.|.|    
Yeast  1158 GDKP------SKYATSYAYQFRYVLIRTSTSFWRS-----LNYIMSKMMLMLVGGLYIGFTFFNV 1211

  Fly   433 EPSQLGVQAVQGALFIMI------------------------------------------SENTY 455
            ..|.:|:|....|.||.|                                          ||..|
Yeast  1212 GKSYVGLQNAMFAAFISIILSAPAMNQIQGRAIASRELFEVRESQSNMFHWSLVLITQYLSELPY 1276

  Fly   456 HPMYSVLNLFPQGFPL--FMRETRSGLYSTGQYYAANILALLPGMIIEPLIFV----IICYWLTG 514
            |..:|.:......|||  |...:||.:|            .|...|:..|.:|    :|.|....
Yeast  1277 HLFFSTIFFVSSYFPLRIFFEASRSAVY------------FLNYCIMFQLYYVGLGLMILYMSPN 1329

  Fly   515 LRSTFYAFGVTAMCVVLVMNVATACGC---------FFSTAFNSVPLAMAYLVPLDYIFMITSGI 570
            |.|.....|   :|:..:::.   ||.         |::..:.:.|          |.:.:.:.:
Yeast  1330 LPSANVILG---LCLSFMLSF---CGVTQPVSLMPGFWTFMWKASP----------YTYFVQNLV 1378

  Fly   571 FIQVNSLPVAFWWTQFLSWMLYAN--EAMTAAQWSG--VQNITCFQESADLP-----C-FHTGQD 625
            .|.::..||.....:    :.|.|  ...|..::..  ::..|.:.|:.|..     | :..|.:
Yeast  1379 GIMLHKKPVVCKKKE----LNYFNPPNGSTCGEYMKPFLEKATGYIENPDATSDCAYCIYEVGDN 1439

  Fly   626 VL----DKYSFNESN-------VYRNLLAMVGLYFGFHL 653
            .|    .|||:...|       ::.|::|||.:|:.||:
Yeast  1440 YLTHISSKYSYLWRNFGIFWIYIFFNIIAMVCVYYLFHV 1478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 90/236 (38%)
3a01204 67..665 CDD:273361 181/689 (26%)
ABC2_membrane 395..600 CDD:279410 50/267 (19%)
SNQ2NP_010294.1 3a01205 103..1480 CDD:273362 192/754 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341558
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13430
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
TreeFam 1 0.960 - -
54.800

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