DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG25

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_565030.1 Gene:ABCG25 / 843527 AraportID:AT1G71960 Length:662 Species:Arabidopsis thaliana


Alignment Length:680 Identity:190/680 - (27%)
Similarity:310/680 - (45%) Gaps:90/680 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DSTPKLSKRNSSERSL------PLRSYSKWSPTEQGATLVWRDLCVYTNVGGS-----------G 84
            ||:|:||:.....|||      |:             ||.:.|:|....:.|.           |
plant    15 DSSPRLSQDPREPRSLLSSSCFPI-------------TLKFVDVCYRVKIHGMSNDSCNIKKLLG 66

  Fly    85 QRMK-----------RIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILIN 138
            .:.|           .|::..||.|.||..||::|.|||||:||::.:|.|. .|:.:.|.||||
plant    67 LKQKPSDETRSTEERTILSGVTGMISPGEFMAVLGPSGSGKSTLLNAVAGRL-HGSNLTGKILIN 130

  Fly   139 GRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAA 203
            ..:|.....:.:|:|.||||....|||.|.|.|:|.|||.|.::::.:....:.::...||....
plant   131 DGKITKQTLKRTGFVAQDDLLYPHLTVRETLVFVALLRLPRSLTRDVKLRAAESVISELGLTKCE 195

  Fly   204 QTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQ-KGTT 267
            .|.:|:...:.: |||||||::.|.|||.||.:|..||||:|||:.:|.:||.||..||. ||.|
plant   196 NTVVGNTFIRGI-SGGERKRVSIAHELLINPSLLVLDEPTSGLDATAALRLVQTLAGLAHGKGKT 259

  Fly   268 ILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLI----GVL 328
            ::.:||||||::|..|:.|:||::|:..|.|..:.|:::|.:.|:......||||||:    ||.
plant   260 VVTSIHQPSSRVFQMFDTVLLLSEGKCLFVGKGRDAMAYFESVGFSPAFPMNPADFLLDLANGVC 324

  Fly   329 ATDPGYEQASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFD------TEVESFRGV- 386
            .||...|:......|.|...:....|.:.:..:        :..:||.|      |.|.. .|: 
plant   325 QTDGVTEREKPNVRQTLVTAYDTLLAPQVKTCI--------EVSHFPQDNARFVKTRVNG-GGIT 380

  Fly   387 ----AWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALF 447
                .|:.:..:: |...|...|..:...||..|.:|.:.:.|..:   .......|....|.||
plant   381 TCIATWFSQLCIL-LHRLLKERRHESFDLLRIFQVVAASILCGLMW---WHSDYRDVHDRLGLLF 441

  Fly   448 IMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWL 512
            .:.......|.::.:..|||...:|.||..||:|:...|:.|::|..|...::.|..|:...||:
plant   442 FISIFWGVLPSFNAVFTFPQERAIFTRERASGMYTLSSYFMAHVLGSLSMELVLPASFLTFTYWM 506

  Fly   513 TGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMITSGIFIQVNSL 577
            ..||.....|.:|...::|.:..:...|.....|......|...:......|::|.|.:  ||.:
plant   507 VYLRPGIVPFLLTLSVLLLYVLASQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGYY--VNKV 569

  Fly   578 PVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQD-----------VLDKYS 631
            |....|.:::|...|....:.|.|:...:.|...     |.|...|:.           .:::..
plant   570 PSGMVWMKYVSTTFYCYRLLVAIQYGSGEEILRM-----LGCDSKGKQGASAATSAGCRFVEEEV 629

  Fly   632 FNESNVYRNLLAMVGLYFGFHLLGYYCLWR 661
            ..:..::.::..:..::||:.:|.|..|.|
plant   630 IGDVGMWTSVGVLFLMFFGYRVLAYLALRR 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 97/254 (38%)
3a01204 67..665 CDD:273361 181/644 (28%)
ABC2_membrane 395..600 CDD:279410 47/204 (23%)
ABCG25NP_565030.1 PLN03211 1..662 CDD:215634 190/680 (28%)
ABCG_EPDR 70..290 CDD:213180 91/221 (41%)
ABC2_membrane 393..592 CDD:279410 47/204 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm2959
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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