DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG14

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_564383.1 Gene:ABCG14 / 840064 AraportID:AT1G31770 Length:648 Species:Arabidopsis thaliana


Alignment Length:674 Identity:181/674 - (26%)
Similarity:311/674 - (46%) Gaps:66/674 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSDSKRIDVEAPERVEQHELQVMPVGSTIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQ 65
            |||:.||                     |.:..|::.|.|.|             ..|.:..|.:
plant    24 MSDTQSK---------------------SVLAFPTITSQPGL-------------QMSMYPITLK 54

  Fly    66 GATLVWRDLCVYTN--VGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAG 128
            ...:|::.....|:  :|....:.|.|:|..||.:.||..:|::|.||||||||:|.|..|  ..
plant    55 FEEVVYKVKIEQTSQCMGSWKSKEKTILNGITGMVCPGEFLAMLGPSGSGKTTLLSALGGR--LS 117

  Fly   129 TVVQGDILINGRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKEL 193
            ....|.::.||:.....:.|.:|:|.|||:....|||.|.|.|.|.|||...::::|:...:..:
plant   118 KTFSGKVMYNGQPFSGCIKRRTGFVAQDDVLYPHLTVWETLFFTALLRLPSSLTRDEKAEHVDRV 182

  Fly   194 LERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATL 258
            :...||.....:.|| |...:.:||||:||::...|:|.||.:|..||||:||||.:|.::|.|:
plant   183 IAELGLNRCTNSMIG-GPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTI 246

  Fly   259 YELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADF 323
            ..||..|.|::.|||||||:::..|:.|:||::|...:.|:...|:.:|::.|:......||||.
plant   247 KRLASGGRTVVTTIHQPSSRIYHMFDKVVLLSEGSPIYYGAASSAVEYFSSLGFSTSLTVNPADL 311

  Fly   324 LIGVL-ATDPGYEQASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPF------DTEVE 381
            |:.:. ...|..::.:....|....:..||:..|.....:..|:..|:|.::.:      :.:.|
plant   312 LLDLANGIPPDTQKETSEQEQKTVKETLVSAYEKNISTKLKAELCNAESHSYEYTKAAAKNLKSE 376

  Fly   382 SFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGAL 446
            .:....||:  ..|.|:..:...|..:...||..|.|::||:.|..:..|.:..   :|.....|
plant   377 QWCTTWWYQ--FTVLLQRGVRERRFESFNKLRIFQVISVAFLGGLLWWHTPKSH---IQDRTALL 436

  Fly   447 FIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYW 511
            |.......::|:|:.:..|||...:.::|..||:|....|:.|..:..||..:..|..||.|.||
plant   437 FFFSVFWGFYPLYNAVFTFPQEKRMLIKERSSGMYRLSSYFMARNVGDLPLELALPTAFVFIIYW 501

  Fly   512 LTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMITSGIFIQVNS 576
            :.||:.....|.::.:.|:..:.||...|..|.....::..|.........:|:|..|.::|  .
plant   502 MGGLKPDPTTFILSLLVVLYSVLVAQGLGLAFGALLMNIKQATTLASVTTLVFLIAGGYYVQ--Q 564

  Fly   577 LPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQ----ESADLPCFHTGQDVLDKYSFNESNV 637
            :|....|.::||:..|..:.:...|::......|.:    ...|.|...         |...:|:
plant   565 IPPFIVWLKYLSYSYYCYKLLLGIQYTDDDYYECSKGVWCRVGDFPAIK---------SMGLNNL 620

  Fly   638 YRNLLAMVGLYFGFHLLGYYCLWR 661
            :.::..|..:..|:.|:.|..|.|
plant   621 WIDVFVMGVMLVGYRLMAYMALHR 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 86/233 (37%)
3a01204 67..665 CDD:273361 169/608 (28%)
ABC2_membrane 395..600 CDD:279410 51/204 (25%)
ABCG14NP_564383.1 PLN03211 10..646 CDD:215634 181/674 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm2959
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

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