DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and ABCG28

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_200882.4 Gene:ABCG28 / 836195 AraportID:AT5G60740 Length:1109 Species:Arabidopsis thaliana


Alignment Length:723 Identity:187/723 - (25%)
Similarity:315/723 - (43%) Gaps:170/723 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDSDSKR-------------IDVEA-PERVEQHELQV--------MPVGSTIEVPS--------- 35
            |.||:|:             .|:|. ||..|...|::        .|.|..:...|         
plant   399 SSSDTKKGKKKEKNKLTEMLHDIEQNPEDPEGFNLEIGDKNIKKHAPKGKALHTQSQMFRYAYGQ 463

  Fly    36 LDSTPKLSKRN---------SSERSLPLRSYSKWSPTEQGATLVWRDLCVYTNVGGSGQRMKRII 91
            ::....:.::|         |....:.:|.    .|..:   :.::||.:  .:.|..:.:.|.:
plant   464 IEKEKAMQEQNKNLTFSGVISMANDIDIRK----RPMIE---VAFKDLSI--TLKGKNKHLMRCV 519

  Fly    92 NNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGR--RIGPFMHRISGYVY 154
               ||.:.||.:.|:||.||:||||.::.|..:.| |.::.|.||:||:  .|..: .:|.|:|.
plant   520 ---TGKLSPGRVSAVMGPSGAGKTTFLTALTGKAP-GCIMTGMILVNGKVESIQSY-KKIIGFVP 579

  Fly   155 QDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGG 219
            |||:..|:|||.|:|.|.|..||...:.|.|:.|:::.::|..||.....:.:|: .:|:.:|||
plant   580 QDDIVHGNLTVEENLWFSARCRLPADLPKPEKVLVVERVIESLGLQHVRDSLVGT-VEKRGISGG 643

  Fly   220 ERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFN 284
            :|||:...:|::..|.:|..||||:||||.|:|.|:..|...|.:|..|...:||||..||..|:
plant   644 QRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVVHQPSYTLFRMFD 708

  Fly   285 NVMLLA-DGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVL------ATDPG--YEQASQR 340
            :::||| .|.:.:.|..:....:|::.|...||..||.|:.|.:|      :|..|  |:|...|
plant   709 DLILLAKGGLICYQGPVKKVEEYFSSLGIVVPERVNPPDYYIDILEGILKPSTSSGVTYKQLPVR 773

  Fly   341 SAQHLCDQFAVSSAAKQRDMLVNLEIHMAQS-------------GNFPFDTEVESFRGVAWYKRF 392
            ...|       :......|||.::| .||.|             |:...| :..||.|..|..  
plant   774 WMLH-------NGYPVPMDMLKSIE-GMASSASGENSAHGGSAHGSVVGD-DGTSFAGEFWQD-- 827

  Fly   393 HVVWLRASLTLLRD-----------------PTI-------------QWLRFIQKIAMAFII--- 424
                ::|::.:.:|                 |.:             |.||..:.:|:.::|   
plant   828 ----VKANVEIKKDNLQNNFSSSGDLSEREVPGVYQQYRYFLGRLGKQRLREARTLAVDYLILLL 888

  Fly   425 -GACFAGTTEPSQLGVQAVQGALFIMISENTYHPM---YSVLNL-------FPQGFPL----FMR 474
             |.|         ||..|       .:|:.|:..|   |:|:.:       ..:.|.|    :.|
plant   889 AGIC---------LGTLA-------KVSDETFGAMGYTYTVIAVSLLCKITALRSFSLDKLHYWR 937

  Fly   475 ETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATAC 539
            |:|:|:.|...:.|.:.:... ..|::||:::.:.|:....|||     ||...|||:..|....
plant   938 ESRAGMSSLAYFLAKDTVDHF-NTIVKPLVYLSMFYFFNNPRST-----VTDNYVVLICLVYCVT 996

  Fly   540 GCFFSTA--FNSVPLAM-AYLVPLDYIFMITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQ 601
            |..::.|  |...|..: :.|:|:....:.||   ...|.:..:.....:..|.|.|.....|.:
plant   997 GIAYTLAILFEPGPAQLWSVLLPVVLTLIATS---TNDNKIVDSISELCYTRWALEAFVVSNAQR 1058

  Fly   602 WSGVQNIT 609
            :.||..||
plant  1059 YKGVWLIT 1066

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 85/234 (36%)
3a01204 67..665 CDD:273361 170/618 (28%)
ABC2_membrane 395..600 CDD:279410 51/255 (20%)
ABCG28NP_200882.4 ABCG_EPDR 496..723 CDD:213180 85/237 (36%)
3a01204 513..1103 CDD:273361 167/600 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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