DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG23

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_197442.2 Gene:ABCG23 / 832061 AraportID:AT5G19410 Length:633 Species:Arabidopsis thaliana


Alignment Length:681 Identity:183/681 - (26%)
Similarity:310/681 - (45%) Gaps:122/681 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 STIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQGATLVWRDLCVYTNVGGSGQRMKRIINN 93
            |.|...:.:|..:.|..:||..|.||.:.:::|.|             .||:..:..... |:|:
plant    28 SIILFSASNSPDEFSSASSSFSSSPLPTPNRYSLT-------------VTNLSYTINHTP-ILNS 78

  Fly    94 STGAIQPGTLMALMGSSGSGKTTLMSTLAFR------QPAGTVVQGDILINGRRIGPF--MHRIS 150
            .:.|.:...::|::|.||:||:||:..::.|      .|:..|     |:|.|:|..:  :.|:.
plant    79 VSLAAESSKILAVVGPSGTGKSTLLKIISGRVNHKALDPSSAV-----LMNNRKITDYNQLRRLC 138

  Fly   151 GYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDK-K 214
            |:|.|||..|..|||.|.|.:.|...| |..:.:||...::.||...||:....:.:|.||:: :
plant   139 GFVPQDDDLLPLLTVKETLMYSAKFSL-RDSTAKEREERVESLLSDLGLVLVQDSFVGEGDEEDR 202

  Fly   215 VLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQ-KGTTILCTIHQPSSQ 278
            .:|||||||::.|||::.:|.||..||||:||||.::.|:|..|..:|: |..|:|.:|||||.:
plant   203 GVSGGERKRVSIAVEMIRDPPILLLDEPTSGLDSRNSLQVVELLATMAKSKQRTVLFSIHQPSYR 267

  Fly   279 LFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSAQ 343
            :.|..::.::|:.|.|...||.:|.....|..|:..||..||.:|.:.::        .|.|:  
plant   268 ILDYISDYLILSRGSVIHLGSLEHLEDSIAKLGFQIPEQLNPIEFAMEIV--------ESLRT-- 322

  Fly   344 HLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTE-------VESFRGVAWYKRFHVVWLRASL 401
                 |..:|.|.           :..|..:|.:.|       .|:|| |........:..|...
plant   323 -----FKPNSVAV-----------VESSSMWPENNENDGIISKKEAFR-VLDVTEISYLCSRFCK 370

  Fly   402 TLLRDPTIQWLRFIQKIAMAFIIGACFA-------GTTEPSQLGVQAVQGALFIMISENTYHPMY 459
            .:.|...:...|.:|.:.....:|:.:.       |..|  :||:.|.  :|..::|...     
plant   371 IIYRTKQLFLARTMQAVVAGLGLGSVYTRLKRDEEGVAE--RLGLFAF--SLSFLLSSTV----- 426

  Fly   460 SVLNLFPQGFPLFMRETR-------SGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRS 517
                   :..|:::||.|       .|.|....|..||.:|.:|.:.:..|:|.|..||:.||..
plant   427 -------EALPIYLRERRVLMKESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVYWIVGLNP 484

  Fly   518 TFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYI------------FMITSGI 570
            :..||....:||.|::.:|::...|.|.            |..|:|            |.:.||.
plant   485 SIQAFSFFVLCVWLIILMASSLVLFLSA------------VSPDFISGNSLICTVLGAFFLFSGY 537

  Fly   571 FIQVNSLPVAFWWTQFLSWMLYANEAMTAAQ-WSGVQNITCFQESADLPCFHTGQDVLDKYSFNE 634
            ||....:|..:.:..::|...|..|:|...: ||  ....|| .|.::.|..||:|||.:...::
plant   538 FIPKEKIPKPWMFMYYVSLYRYPLESMVVNEYWS--MREECF-SSGNMGCLMTGEDVLKERGLDK 599

  Fly   635 SNVYRNLLAMVGLYFGFHLLGYYCLWRRARK 665
            ...:.|:..|:..:..:.:|.:..|.|:|.|
plant   600 DTRWINVGIMLAFFVFYRILCWGILLRKASK 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 81/241 (34%)
3a01204 67..665 CDD:273361 171/641 (27%)
ABC2_membrane 395..600 CDD:279410 51/230 (22%)
ABCG23NP_197442.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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